Paraburkholderia dioscoreae: PDMSB3_1948.1
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Entry
PDMSB3_1948.1 CDS
T08115
Name
(GenBank) DNA-binding domain-containing protein, AraC-type
KO
K18991
AraC family transcriptional regulator, activator of mtrCDE
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdio03000
]
PDMSB3_1948.1
Transcription factors [BR:
pdio03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PDMSB3_1948.1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_6
HTH_18
HTH_AraC
Cupin_2
Cupin_3
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
VVD33232
UniProt:
A0A5Q4YY22
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All DBs
Position
II:complement(2023317..2024267)
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AA seq
316 aa
AA seq
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MDTLSRLIDLARPQASLDLRCLLSGAFDLDHDPMEAGIAPFHLVLDGACIVETADGAQHA
LSAGDFMLFPRGAAHRVRDVKRLAAAAPLTLGHDGMLPLRRNDGHDDARVSADVDLLCGR
FLYAPGSSALLLNALPDPFHVSLSGMQTLGSLQTVIALMRTEAERRQAGALAIVTALSQA
LFAMALRAHGEQNASTSGVLALLADARLGASVQGMLGAPERAWSIAELGELAAMSRATYA
RHFNERAGMTVMDFLTQIRMTIACDLLRRTQRSAAEIGEAVGYQSEAAFGKAFQQSVGVT
PGRYRRLPQENGAAQS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggatacgctcagccgactgatcgacctcgcccggcctcaagccagtctcgacctgcgt
tgcctgctttcgggcgccttcgacctcgatcatgacccgatggaagccggcattgcgccg
ttccacctggtgctggacggcgcgtgcatcgtcgaaaccgccgacggcgcgcagcacgcc
ctgagcgcgggcgatttcatgctgtttccccgcggcgcggcgcatcgcgtgcgcgacgtg
aagcggttggcggccgccgcgccgttgacgctcggccacgacggcatgctgccgttgcgg
cgcaatgacggtcacgatgacgcacgcgtctccgccgacgtcgatcttctgtgcggccgt
ttcctctatgcaccgggatcatccgccttgctgctgaatgcgttgcccgatccgtttcat
gtttcgctgagcggtatgcaaacgctgggctcgctgcaaacggtaatcgcgctgatgcgg
accgaggccgaacgacgccaggcgggcgctcttgcgatcgtcaccgcattgagtcaggcg
ctctttgcgatggcattgcgcgcgcacggcgagcagaacgcgtcgacgtcgggcgtgctc
gcgctacttgccgacgcgcgcctcggtgcttccgtgcaaggcatgctgggcgctcccgag
cgggcgtggtccattgcggaactcggcgagctcgccgccatgtcgcgcgcgacttacgcg
cgccatttcaacgagcgcgcgggcatgacggtgatggactttctcacgcagatccgtatg
accatagcgtgcgatctgctgcgacgcacgcagcgcagcgcggccgagatcggcgaagcg
gtgggctatcaatcggaggcggccttcggcaaggcgtttcagcaaagcgtgggcgtgaca
ccgggacgttaccggcgtcttccgcaggagaacggtgcggcgcaaagctag
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