Paraburkholderia dioscoreae: PDMSB3_1981.1
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Entry
PDMSB3_1981.1 CDS
T08115
Name
(GenBank) Outer membrane protein (Porin)
KO
K03285
general bacterial porin, GBP family
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
PDMSB3_1981.1
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
VVD33265
UniProt:
A0A5Q4YWB0
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Position
II:2060616..2061797
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AA seq
393 aa
AA seq
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MNKINLKIDIRATTVLLLLISPTLHAQSSVRLSGSIDAGVAYVSDIGNANGHQSAWQAKN
GDINISRWALSGNEQISSDLSAVFTLTNGFSVMNGTAAQQGRLFGFQSWMGLASQSKGTL
TFGRQFDEVVQFVEPFALGGTRYGGTAFAHVFDNDNLDNYTRTNNSVKYTSPTLLGGLKF
GALYGFSNEAGGFADNRGYSFGLGYQYTNLDLGAGYFQFNNASNLATANTNGAEPAGAPF
NAARQRTWAAGGLYHFTQVAVGLILSETRLDKASSINNVADTAISLPGDDVRFDNVEVNV
RYAVTPRWDISAGYTFTLGRFATPTGVRYPKWHQAGIVNTYFLSPRTDVYAEAIYQRANQ
LGGTGIQGAQISNFSRASGANQFVAALGLRHRF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaataaatttgaaaatagacattcgggcaacaaccgttttgcttttgctcatc
agtccgaccctgcacgcacaaagctcggtgcgtctgtcaggatcgatcgacgcgggcgtc
gcctacgtcagcgacatcggcaacgccaatggtcatcaaagtgcctggcaggcgaagaac
ggcgacatcaacatcagccgctgggccttgtcgggcaacgagcagatctccagcgatctc
agcgcggtcttcacgctgaccaacggtttcagcgtgatgaacggcaccgccgcgcaacaa
ggccgcctgtttggttttcagtcgtggatgggacttgcttcccagtcgaaaggcacgctc
acattcggtcgtcagttcgacgaagtggtccagttcgtcgagccattcgcgctgggcgga
acacgatacggcggtacagccttcgcgcacgttttcgacaacgacaacctcgacaactac
acacgcacgaacaattcagtcaaatacacgagcccgacgctgctgggcggactaaagttc
ggggcgctgtacggcttctcgaacgaagcgggcggctttgcggacaaccggggctacagt
ttcggtctcggctatcagtacaccaatctggacctcggcgcaggctacttccagttcaat
aacgcatcgaacctcgcgacggccaatacgaacggcgccgagccggccggcgcgccgttc
aacgcggcgcggcagcgcacctgggcggcgggcggcctttatcacttcacccaggtggcg
gtcggtctcatactgagcgaaacgcggctggacaaggcttcgtcgatcaacaacgtggct
gataccgccatcagccttcccggcgacgacgtgcgcttcgacaacgtcgaagtcaacgtg
cgctacgccgtgaccccgcggtgggatatttcggcaggctatacgttcacgctcggccgc
ttcgccaccccgacgggcgtgcgctatccaaagtggcatcaggccggcatcgtcaacacc
tacttcctgtcgccccgcaccgacgtctatgcggaagccatctatcaacgcgccaaccag
ttgggaggaaccggaattcagggtgcgcagatctcgaacttctcgcgcgcatccggggca
aaccagttcgtcgccgctttgggtttgcggcaccgtttctag
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