Paraburkholderia dioscoreae: PDMSB3_2030
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Entry
PDMSB3_2030 CDS
T08115
Symbol
clpX
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pdio03110
]
PDMSB3_2030 (clpX)
Chaperones and folding catalysts [BR:
pdio03110
]
Heat shock proteins
HSP100
PDMSB3_2030 (clpX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
zf-C4_ClpX
AAA
ClpB_D2-small
AAA_22
AAA_5
Mg_chelatase
RuvB_N
MCM
Sigma54_activ_2
Sigma54_activat
AAA_14
AAA_18
AAA_7
ResIII
AAA_16
IstB_IS21
NACHT
DEAD
AAA_28
TIP49
T2SSE
ABC_tran
AAA_24
AAA_23
AAA_15
AAA_29
AAA_33
TsaE
nSTAND3
PduV-EutP
AAA_30
SMC_N
GIP1_N
PhoH
AAA_25
RNA_helicase
AAA_8
Motif
Other DBs
NCBI-ProteinID:
VVD28486
UniProt:
A0A5Q4Z217
LinkDB
All DBs
Position
I:2074549..2075820
Genome browser
AA seq
423 aa
AA seq
DB search
MADKKGSNSEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNEIIRDEAAGAGIEAG
LSKSDLPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKHLDKKDEIELSKSNILLI
GPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVDKAQR
GIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQV
DTTNILFICGGAFDGLEKVIVDRTEKTGIGFGASVKSKQDRDAGEVLREVEPEDLIKFGL
IPELIGRLPVVATLGKLDEVALMKILVEPKNALVKQYHKLFNMERVELEIRPAALQAVAR
KAIRRKTGARGLRSILEQALLDVMYDLPQMKGVSKVIIDDNVIDGDGKPLLIYEDAPKVA
GSN
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagaaaggttctaacagcgaaaagctgttgtattgctcgttttgcggtaag
agccagcatgaagttaaaaaactgattgccggcccgtcggtgttcatctgcgatgaatgt
atcgacctgtgcaacgaaatcatccgcgatgaggctgcaggtgcgggcattgaggcgggc
ttgtccaagtccgatctgccgagtccgcaggaaatccgtgaaatcctcgaccagtatgtg
atcggtcaggaacgcgcgaagaaaattctcgcggtggcggtgtacaaccactacaagcgc
ctgaagcatctcgacaagaaggacgagatcgagctgtccaagagcaacatcctgctgatc
ggcccgaccggttccggcaagacgttgctcgcgcaaacgctcgcgcgtcttctgaacgtc
ccgttcgtgattgccgacgcaaccacgctgacggaagccggctacgtcggcgaagacgtc
gagaacatcattcagaagctgctgcaaaactgcaattatgaagtcgacaaggctcagcgc
ggcattgtctacatcgacgaaatcgacaagatcagccgcaagtccgacaacccgtctatc
actcgtgacgtttcgggtgagggcgtgcaacaggcgttgctcaagctggtcgagggtacg
atggcgtcggtgccgccccagggtggccgtaagcacccgaatcaggacttcatccaggtc
gacaccaccaacattctgttcatttgcggtggcgcgttcgacggcctcgaaaaggtcatc
gtcgatcgtaccgagaagaccggtattggctttggcgcaagcgtgaagagcaagcaggac
cgcgacgccggcgaagtgctgcgcgaagtggagccggaagatctgatcaagttcggcctg
attcccgaactgatcggccgtctgccggtggtggccacgctcggcaagctcgacgaagtc
gcgttgatgaaaattctcgtcgaaccgaagaatgcgctggtgaagcagtaccacaagctg
ttcaatatggagcgcgtcgagctcgaaattcgcccggccgcgttgcaggctgtcgcgcgt
aaggcaattcgtcgcaagacgggtgctcgtggtttgcgctccatcctggaacaggcgttg
cttgatgtgatgtacgacctgccgcagatgaaaggcgttagcaaggtcatcatcgacgac
aacgttattgacggcgacggcaaaccgctactgatctacgaagacgcgcccaaggtcgcg
ggttcgaactga
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