Paraburkholderia dioscoreae: PDMSB3_2066
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Entry
PDMSB3_2066 CDS
T08115
Name
(GenBank) DNA polymerase III, delta'' subunit (fragment)
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio03030
DNA replication
pdio03430
Mismatch repair
pdio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PDMSB3_2066
03430 Mismatch repair
PDMSB3_2066
03440 Homologous recombination
PDMSB3_2066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdio03032
]
PDMSB3_2066
03400 DNA repair and recombination proteins [BR:
pdio03400
]
PDMSB3_2066
Enzymes [BR:
pdio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PDMSB3_2066
DNA replication proteins [BR:
pdio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PDMSB3_2066
DNA repair and recombination proteins [BR:
pdio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PDMSB3_2066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
VVD28522
UniProt:
A0A5Q4ZLB1
LinkDB
All DBs
Position
I:2115345..2116112
Genome browser
AA seq
255 aa
AA seq
DB search
MPRTKKPTRPTPTKAKKTRTPSKEIKIEQIRGLLDFVGVGSHRGGARVVVLYPAEALNIA
AANALLKTLEEPPAGVVFLMVSARIDRLLPTIISRCRQWPMTMPAPDVATKWLAAQGVAE
APALLAEAGGAPLTALALASDENRALRDWTLKQLAAGPDCDAFACGEALQKLPVPLVLGW
LQRWMYDLLAQRTAGAPRYFPQASAALTRCASQADASAFARFMRTVTRQRAVENHPLNAR
LVFEELFIGYRDLFA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggacgaaaaagccgacaaggccgacgccgacgaaggcaaaaaaaacccgcacg
cccagcaaggaaatcaagatcgagcagattcgcggcttgctcgatttcgtcggcgtgggt
tcgcaccgcggcggcgcgcgcgtggtcgtgctgtatccggcggaagcgctgaatatcgcc
gcggccaacgcgcttctgaagacgctcgaagaaccgccggcgggcgtcgtgttcctgatg
gtgtcggcgcgcatcgaccgcctcctgccgaccatcatcagccgctgccgccaatggccg
atgaccatgcccgcgccggacgtggcaacgaagtggcttgccgcgcaaggcgtggccgag
gcgcccgcgctgctcgccgaagccggcggcgcgccgctcacggcgcttgcgctcgccagc
gacgagaaccgcgcgctgcgcgactggacgctgaaacagctcgcggccggccccgactgc
gacgccttcgcctgcggggaggcgctgcagaagctgcccgtgccgctggtgctaggctgg
ctgcaacgctggatgtacgatctgctggcgcagcgcacggcgggcgcaccgcgttatttt
ccacaggcgtcggcggcgttgacgcgctgtgcgtcgcaggccgacgccagcgcgtttgcg
cgcttcatgcgtaccgtgacgcgccagcgcgccgtcgaaaaccatccgttgaatgcgcgg
ctggtgttcgaggaactgtttatcggctaccgcgatctgttcgcttga
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