Paraburkholderia dioscoreae: PDMSB3_2106
Help
Entry
PDMSB3_2106 CDS
T08115
Symbol
glcD
Name
(GenBank) glycolate oxidase subunit, FAD-linked
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00630
Glyoxylate and dicarboxylate metabolism
pdio01100
Metabolic pathways
pdio01110
Biosynthesis of secondary metabolites
pdio01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PDMSB3_2106 (glcD)
Enzymes [BR:
pdio01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
PDMSB3_2106 (glcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
VVD28562
UniProt:
A0A5Q4ZLD8
LinkDB
All DBs
Position
I:complement(2163221..2164720)
Genome browser
AA seq
499 aa
AA seq
DB search
MSYQYDERVDGPLATHDKATVVAQLQALIPDLQLLHEQEDLRPFECDGLAAYRATPMMVA
LPDKVEQVEALLKFANAHKIPVVARGAGTGLSGGALPLDKGILLVMARFNRILEVDPEAC
VARVQPGVRNLAISQAAAPHGLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVNNIL
KLEILTIDGERITLGSDALDAPGFDFLALFTGSEGMLGIVTEVTVKLLTKPQSAKVLLAS
FDDVEKAGAAVAQIIGAGVIPGGLEMMDNLAIRAAEDFIHAGYPVDAEAILLCEVDGVES
DVREDVACVEALLRAAGATDIRLAKDEAERQRFWAGRKNAFPAVGRISPDYYCMDGTIPR
RELPRVLKGIEDLSKEYGLQVANVFHAGDGNMHPLILFDANAPGETERAEAIGARILELC
VAVGGSITGEHGVGREKINQMCAQFNSDELTFFHALKAAFDPQGLLNPGKNVPTLHRCAE
FGSMHVHHGALPFPELERF
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccaatacgatgaacgcgtcgacggcccgctcgcgacgcacgacaaagccacc
gtcgtcgcacaattgcaggcgctgatccccgatctgcaactccttcacgaacaggaagat
ctgcgtccgttcgaatgcgacggcctcgccgcctatcgcgcaacgcccatgatggtcgcg
ctgcccgacaaggtcgaacaggtcgaggcgctgctgaaattcgccaacgctcacaagatt
ccggtggtcgcgcgcggtgccggcaccggtttgtcgggcggcgcgctgccgctggacaaa
ggcattctgctggtgatggcgcgctttaaccggattctcgaagtcgatcccgaggcctgc
gtggcgcgcgttcagcccggcgtgcgcaatctcgcgatttcgcaggccgcggcgccacat
ggcctctactacgcgcccgacccgtcgtcgcagattgcctgctcgatcggcggcaatgtc
gcggaaaacgcgggcggcgtgcattgcctgaagtacgggctgaccgtcaataacatcctc
aagctcgagattctcactatcgacggcgagcgcatcacgctcggctcggacgcgctcgac
gcgccgggtttcgacttcctcgcgctcttcaccggctcggaaggcatgctcggcatcgtc
accgaagtcacggtgaagctgctcaccaaaccgcaaagcgcgaaagtgctgctggccagt
tttgacgacgtcgaaaaagccggcgcggcggtcgcccagatcatcggcgcgggcgtgatt
ccgggcggcctcgaaatgatggacaacctcgcgatccgcgcggcggaagacttcatccac
gcgggctatccggtcgacgccgaagcgatcctgctgtgcgaagtcgacggcgtggaaagc
gacgtgcgcgaagacgtggcctgcgtggaagcgctgctgcgcgcggccggcgccaccgac
atccgtctcgcgaaagacgaggccgaacggcagcgcttctgggctggccgcaagaacgcg
ttccccgccgtgggccgcatctcgcccgattactactgcatggacggcacgattccgcgc
cgcgaattgccgcgcgtgctcaaaggcatcgaagacctctcgaaggaatacggcctgcaa
gtcgccaacgtatttcatgccggcgacggcaacatgcatccgctgatcctgttcgatgcc
aacgcgcccggcgaaaccgaacgcgccgaagcgatcggcgcgcgcattctcgaactgtgc
gtggcggtgggcggcagcatcaccggcgaacacggtgtgggccgcgaaaagatcaaccag
atgtgcgcgcaattcaatagcgacgaactcaccttcttccacgcattgaaagccgcattc
gatccgcaaggcctcctcaaccccggcaagaacgtaccgaccttgcaccgctgcgccgaa
ttcggctcgatgcacgtgcatcacggcgcgctgccctttcccgaactggagcgtttctga
DBGET
integrated database retrieval system
