Paraburkholderia dioscoreae: PDMSB3_2111
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Entry
PDMSB3_2111 CDS
T08115
Symbol
nasD
Name
(GenBank) nitrite reductase, large subunit, nucleotide-and Fe/S-cluster binding
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00910
Nitrogen metabolism
pdio01100
Metabolic pathways
pdio01120
Microbial metabolism in diverse environments
pdio01310
Nitrogen cycle
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
PDMSB3_2111 (nasD)
Enzymes [BR:
pdio01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
PDMSB3_2111 (nasD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Pyr_redox
Fer2_BFD
NIR_SIR_ferr
Rubredoxin_C
Pyr_redox_3
NAD_binding_8
AlaDh_PNT_C
GIDA
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
VVD28567
UniProt:
A0A5Q4YT60
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All DBs
Position
I:2168879..2171467
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AA seq
862 aa
AA seq
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MPQDGARNQHIEETALMKIIVIGHGMVGHKLVECLAQDAAHGLDITVLCEESRPAYDRVH
LSEFFAGKTADDLSLVEPGFFERQNVLLKLNAKAVAIDRDARTVTVSTGETLPYDKLVFA
TGSYPFVPPVQGRERADCFVYRTIDDLEAMHECGARSKTGTVVGGGLLGLECAKALRDMG
LQTHVVEFAPRLMAVQVDDGGGRVLRTKIEELGVTVHTQKNTTAIVDGEAGTHRMQFADG
SHLDTDMIVFSAGIRPRDDLARESGLTLGPRGGIVIDNACRTSDPHIYAIGECALWNGQL
FGLVAPGYEMARAVAKQLLGGAAEFAGADMSTKLKLMGVDVASIGDAHGSTPGSRAYQFS
DERKQVYKKLVVSECGKYLLGGVMVGDASEYGTLLQMMLNRIELPASPEFLILPQADGNA
KPALGVEALPAGAQICSCNNVSKGELCAAVCAGATDIGALKGATGAGTSCGGCVPLVTQV
MKAEMKKQGLVVNNHVCEHFPYSRQELYHIVRVEGVRSFGALLAKHGHGLGCDICKPVVA
SILASCWNEFVLKKEHAALQDTNDYYLANIQRDGTYSVVPRMAGGEVTPDGLIAVGQVAK
KYGLYTKITGGQRVDLFGARVEQLPLIWEELIAAGFESGHAYGKSLRTVKSCVGSTWCRY
GVGDSVGLAVEIENRYKGLRTPHKIKFGVSGCTRECAEAQGKDVGIIATEKGWNLYVCGN
GGMKPRHAELLASDLDQETLVRYIDRFLMFYVRTADRLQRTSVWRDNLEGGLEYLIDVVV
NDRLGVAGELESEMQHVVDTYECEWKKAVTDPETRKRFRHFVNSSESDSNIAFVEERGQI
RPATPAERRSKLAAIPVVAETV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagacggcgcccgcaaccagcacattgaggaaaccgcgctcatgaaaatcatc
gttatcggtcacggcatggtcgggcacaaactggtcgagtgcctcgcacaagacgccgcg
cacggcctcgacatcacggtgctgtgcgaagagtcgaggccggcctacgaccgcgtgcac
ctgtccgagtttttcgcgggcaagacggcggacgatctgtcgctggtcgagccgggtttc
ttcgaacgccagaacgtgttgctcaagctgaacgcgaaagccgtggcgatcgatcgcgat
gcgcgcaccgtgacggtatcgacgggtgaaacattgccttatgacaagctggttttcgcc
accggctcctatccgttcgtgccgcccgtgcaggggcgagagcgcgccgattgcttcgtg
taccgaaccatcgacgatctcgaagccatgcatgaatgcggtgcgcgctcgaagacgggc
acggtggtcggcggcggcttgcttggtctcgaatgcgcgaaggcactgcgcgacatgggt
ctgcaaacccacgtggtcgaattcgcgccgcgtctgatggccgtgcaggtggacgacggc
ggcggccgcgtgctgcgcacgaagatcgaagagctgggcgtgacggtgcatacgcagaag
aacaccacggcgatcgtggacggcgaagcgggcacgcaccgcatgcaattcgcggacggc
agccatctcgacaccgacatgatcgtgttctcagcgggcattcgcccgcgcgacgatctg
gcgcgcgaaagcggtctgacgctcggcccgcgcggcggcatcgtgatcgataacgcgtgc
cgcaccagcgatccgcacatctatgcgatcggcgaatgcgcgctgtggaacggccaactg
ttcggcctcgtggcgccgggttatgaaatggcccgcgcggtggcgaagcaattgctcggt
ggcgcggccgaattcgccggcgccgacatgagcaccaagctcaagctgatgggcgtggac
gtggcgagtatcggcgacgcgcatggcagcacgccgggcagccgcgcctaccagttcagc
gacgaacgcaagcaggtctacaagaaactggtggtgtccgaatgcggcaaatacctgctg
ggcggcgtgatggtgggcgacgcgagcgagtacggcacgctcttgcagatgatgttgaac
cgcatcgagttaccggcatcgcctgaattcctgatcctgccgcaggcggacggcaacgcg
aagcccgcgctcggcgtcgaggcgttgcccgccggcgcgcagatctgctcgtgcaacaac
gtctcgaagggcgagctatgcgccgccgtctgcgcgggcgcgaccgacatcggcgcgctc
aaaggcgcgaccggcgccggcacctcgtgcggcggctgcgtgccgctcgttacccaggtg
atgaaggccgagatgaagaagcagggtctcgtggtcaacaatcacgtttgcgagcacttc
ccgtattcgcgccaggagctgtatcacatcgtgcgtgtggaaggcgtgcgcagcttcggc
gcactgctcgcgaagcacggccacggtctcggttgcgatatctgcaagccggtggtggcg
agcattctcgcgtcgtgctggaacgagttcgtgctgaagaaggaacacgccgcgttgcag
gacaccaacgactactacctcgccaacatccagcgcgacggcacctattcggtcgtgccg
cgtatggcgggcggcgaagtgacgcccgacggtttgatcgcggtcggccaggtggcgaag
aaatacggcctctacacgaaaatcaccggcggtcagcgtgtcgatctgtttggcgcgcgc
gtcgagcaattgccgctcatctgggaagaactgatcgccgccggtttcgaatctggccac
gcgtacggcaagtcgctgcgcaccgtgaagtcgtgtgtcggttcgacgtggtgccgctat
ggcgtaggcgattcggtgggtctcgcggtcgagatcgagaaccgctacaagggtctgcgc
acgccgcacaagatcaagttcggcgtgtcgggctgcacgcgtgaatgcgcggaagcgcag
ggcaaggacgtcggcatcatcgcgaccgagaagggctggaatctctatgtgtgcggcaac
ggcggcatgaaaccgcgccacgctgaactgctcgcatcggacctcgatcaggaaacgctg
gtgcgctacatcgaccgcttcctgatgttctacgtgcgcaccgccgatcgtctgcaacgc
accagcgtgtggcgcgacaacctcgagggcggccttgaatatctgatcgacgtggtcgtc
aacgatcgtctcggggtggccggcgaactcgagtcagagatgcagcacgtggtcgacacc
tacgagtgcgaatggaagaaggctgtcaccgatcccgaaacgcgcaagcgcttccgtcat
ttcgtcaacagcagcgagtccgacagcaacatcgctttcgtggaggaacgtggtcagatc
cgaccggccacgcccgccgagcgacgctcgaagctcgccgcgattcccgtggtcgccgaa
accgtctga
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