Paraburkholderia dioscoreae: PDMSB3_2133
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Entry
PDMSB3_2133 CDS
T08115
Name
(GenBank) Membrane carboxypeptidase/penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00550
Peptidoglycan biosynthesis
pdio01100
Metabolic pathways
pdio01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PDMSB3_2133
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PDMSB3_2133
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pdio01003
]
PDMSB3_2133
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdio01011
]
PDMSB3_2133
Enzymes [BR:
pdio01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PDMSB3_2133
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PDMSB3_2133
Glycosyltransferases [BR:
pdio01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PDMSB3_2133
Peptidoglycan biosynthesis and degradation proteins [BR:
pdio01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PDMSB3_2133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
VVD28589
UniProt:
A0A5Q4ZD75
LinkDB
All DBs
Position
I:2198151..2200679
Genome browser
AA seq
842 aa
AA seq
DB search
MKRLIPSLLETLEKGLTLANPLIAQALWHLRHPTRRGVLKACAAIPLLFVLYVLILIPFT
PGIGDIRKAKVEQPAQILSADGKLLAEFKPSNREWVKLKDISPNVVNALIATEDHRFYQH
WGLDWRRTASAALHTFSGDRQGGSTITQQLARNLYPDEIGRAPTLTRKLKEAITAFKIEA
LYTKDEILETYLNTVPFLYNAYGIEMAARTYFDKSASDLTVLESATLTGMLKGNSYYNPV
INPERALQRRNTVLGQMVKYGKLTPAAYATLSRKPLRIDFERQTEPPGPAPHFAQQLRKW
LASWADRNDYNMYADGLVVRTTIDSRLQTMATQAVTLQGNQLQGIANSAWGTRAGCSNGR
DLLQTFLRETPDYRAAKDAGLSDDDALKRVSSDRDLVKSLCESKTRVQADFLAMDPRNGQ
IRAWVGSRDFSQDPFDHVQQARRQPGSTFKPFVYAAAFEAGAKPTDTFVDKPVEIPLAGG
EVWRPSDEDEPSERNISLRDGLAYSRNRITAQLMETVGPNKVARLARAMGVRDSELDPVP
SLALGTSPVTLKEMVSAYSTIANLGGYVEPVMVTRIEDRKGDVLAEFAPVPPKQELSADA
DRMLIDVMRDVVNRGTGSSIRSRFGVRGDVAGKTGTTQGNADGWFILIHPQLVAGAWVGF
NDSRVTLRSDYWGQGAHSALPIVGDFFQRAQRSRLIDTRVKFATDQEPGWFAERSARLRE
WFGNLFVSSSPAGPEATVAPRGTTRRAPAAAVPAVPAVPTEPSASVTVAEPRDIPQPPLL
QAPGSAPGSAPTAASGAVDGEARGGGEPALAPTPTPDDVVPPDTGSPANALPETSTNGGS
SP
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgcctgatcccctcattgctggagacccttgaaaaagggctgaccctggcgaac
ccgctgatcgcccaagccctgtggcacttgcgccatccgacccggcgcggcgtgctgaag
gcttgtgccgcgattccgctgctgttcgtcctgtacgtgctgatcctgattccgttcacg
ccgggcatcggcgacatccgcaaggcgaaggtcgagcagccggcgcagattctgtcggcg
gacggcaagctgctggcggaattcaagccctccaaccgcgaatgggtcaagctcaaggac
atctcgccgaacgtggtgaacgcgctgatcgccaccgaagatcaccgtttctaccagcat
tggggtctcgactggcggcgcacggcctcggccgcgctgcatacgttttccggcgaccgg
cagggcggctcgaccatcacccagcagctcgcccgcaatctctaccccgacgagatcggc
cgcgcgccgacgctcacgcgcaagctcaaggaagcgatcacggctttcaagatcgaggcg
ctctacaccaaggacgagattctcgagacctacctgaacacggtgccgttcctctataac
gcgtacggcatcgagatggcggcccgcacctatttcgacaaatcggcctccgatctgacc
gtgctggaaagcgcgacgctcaccggcatgctgaagggcaatagctactacaacccggtg
atcaaccccgaacgtgcgttgcagcggcgcaatacggtgctcgggcagatggtcaagtac
ggcaagctgacgccagcggcctacgccacgctcagccgcaaaccgttgcgcatcgatttc
gagcgccagaccgaaccgcccggaccggcgccgcactttgcgcagcaattgcgcaagtgg
ctggcgtcatgggcggatcgcaacgactacaacatgtacgccgacgggttggtggtgcgc
accaccatcgactcgcgtctgcagactatggccacccaggcggtcaccttgcagggcaac
cagttgcagggcatcgccaattcggcgtggggcactcgcgcgggctgctctaacgggcgc
gacctgctgcaaacctttctgcgcgaaacaccggactatcgcgccgccaaagacgcgggc
ctgagcgacgacgacgcgctcaagcgcgtctcgtccgatcgcgacctcgtgaagtcgctg
tgcgagtccaagacgcgcgtacaggcggactttctggcgatggacccgcgcaacggccag
atccgggcatgggtgggcagccgcgacttcagccaggatccgttcgaccacgtccagcag
gcgcggcgccagccgggttcgaccttcaagccgttcgtctacgcggcggccttcgaggca
ggcgccaagcccaccgataccttcgtggacaagccggtggaaattccgctggcaggcggc
gaagtctggcgtccgagcgacgaggacgagccgagcgaacgcaacatcagcctgcgcgac
ggcctcgcgtattcgcgcaaccggatcaccgcgcagttgatggaaacggtggggccgaac
aaggtcgcgcgccttgcccgcgcgatgggcgtgcgcgacagcgagctggacccggtgccg
tcgctcgcgctgggcacgagccccgtcacgctgaaggagatggtctcggcctacagcaca
atcgccaatctgggcggctacgtggagccggtgatggtcacgcgtatcgaggaccgcaag
ggcgacgtgctggccgagttcgcgccggtgccgcccaaacaggaactctccgccgatgcc
gaccggatgctcatcgacgtcatgcgcgacgtggtgaaccgcggcacggggtcgagcatt
cgcagccgcttcggcgtgcgtggcgatgtcgccggcaagacggggacgacacaggggaat
gcggacggctggttcatcctgatccatccgcagctcgtggcgggcgcgtgggtcggcttc
aacgacagccgcgtgaccttgcgcagcgactattgggggcagggggcgcacagcgcgctg
ccgatcgtcggcgatttcttccagcgcgcgcagcgctcgaggctgatcgatacccgcgtc
aaattcgcgaccgaccaggagccgggctggttcgccgagcgctcggccaggttgcgcgag
tggttcgggaatctgttcgtatcgtcgtcgccggccgggccggaggcgacggttgcgccg
cgcggtacgacgcggcgcgcgccggctgctgctgtgcctgcggtgcctgccgtacccacg
gagccgtcggcgtccgttacggtggcggagccgcgtgacataccgcaaccgccgttgctt
caggcgcccgggtccgcgccgggttcagcgccgacagcagcgagcggggcggtcgacggt
gaagcgcgcggcggtggcgagccggcgttggcgccgacgcccacgcccgacgatgtggtg
ccgccggacaccggcagcccggccaacgcgttgccggaaacgtcgacgaacggcggcagc
tcgccttga
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