Paraburkholderia dioscoreae: PDMSB3_2234
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Entry
PDMSB3_2234 CDS
T08115
Name
(GenBank) putative cat1 operon transcriptional activator
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdio03000
]
PDMSB3_2234
Transcription factors [BR:
pdio03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PDMSB3_2234
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
VVD28690
UniProt:
A0A5Q4ZDL0
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All DBs
Position
I:2309222..2310109
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AA seq
295 aa
AA seq
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MELRQLRYFIAVAEEMNITRAANRLHMTQPPLSRQIQQIEENVGLPLFERGSRPLRLTEA
GRIFYAQAKRLIDEADELGPLTRRLAQLAERVVIGFVPSTLYGALPAVIRAFREAAPHIE
LSLIEMFTIEQLGALKGGRIDVGFGRLRFDDAQLAREVLVEERMIAALPQDHPLARQKKA
LTLAALAQETLIVYPSTPRPSYADQQLSAMHDHALEPKAIHEVRELQTALGLVAAQVGVC
LVPESVEGLRAHGVVYRPIPSANVASPIIMSRRLQDESPTTTLLCSLARELFKRV
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcgccaactccgctatttcatcgcggtcgcggaagaaatgaacatcacgcgg
gccgccaatcgcctgcacatgacgcagccgccgctcagccggcagatccagcagatcgaa
gaaaacgtcggcctgccgctgttcgagcgcggctcgcggccattgcggctgaccgaagcc
ggccgcattttctatgcgcaggcaaagcgcctgatcgacgaagcggacgagctcggcccc
ctcacgcggcgcctcgcgcaactggccgagcgcgtcgtgatcggcttcgtgccgtcgacg
ctctacggcgcgctgcccgccgtgatccgtgcgtttcgtgaagccgcgccgcatatcgaa
ctctcgctgatcgaaatgttcacgatcgagcagctcggggcgctcaagggcggccgcatc
gacgtgggcttcggccgcctgcgcttcgacgacgcgcaactcgcgcgcgaagtcctcgtc
gaagaacggatgattgccgcgctgccgcaagaccacccgctggcgcgccagaagaaagcg
ctgacactggcggcgctcgcgcaggaaaccctgatcgtctatcccagcacgccgcggccg
agctatgccgaccagcagctatcggccatgcacgatcatgcgctggagccgaaggcaatt
catgaagtgcgggaattacagaccgcgttgggtctggtcgcggcacaagtgggcgtgtgt
ctggtgccggaaagcgtggagggtttgcgcgcgcacggcgtagtgtaccggccgattccg
tcagccaacgttgcttcgccgatcatcatgagccgccgtttgcaggacgaatcgccgacc
accaccttgctctgttcgctcgcacgtgagctgttcaaacgggtttaa
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