Paraburkholderia dioscoreae: PDMSB3_2246.1
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Entry
PDMSB3_2246.1 CDS
T08115
Symbol
benD
Name
(GenBank) 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
KO
K05783
dihydroxycyclohexadiene carboxylate dehydrogenase [EC:
1.3.1.25
1.3.1.-]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00362
Benzoate degradation
pdio00364
Fluorobenzoate degradation
pdio00622
Xylene degradation
pdio01100
Metabolic pathways
pdio01120
Microbial metabolism in diverse environments
pdio01220
Degradation of aromatic compounds
Module
pdio_M00551
Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PDMSB3_2246.1 (benD)
00364 Fluorobenzoate degradation
PDMSB3_2246.1 (benD)
00622 Xylene degradation
PDMSB3_2246.1 (benD)
Enzymes [BR:
pdio01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.1 With NAD+ or NADP+ as acceptor
1.3.1.25 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
PDMSB3_2246.1 (benD)
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GFIT
Motif
Pfam:
adh_short
adh_short_C2
KR
Motif
Other DBs
NCBI-ProteinID:
VVD33530
UniProt:
A0A5Q4ZQZ2
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All DBs
Position
II:2335613..2336410
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AA seq
265 aa
AA seq
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MMTMTSSYPRFHEKVVVVTGAAQGIGRGVALRAAAEGAIVVLADRAELVHEVEAEIAALG
SPSLAVIADLETYAGACKLMRAALDAFGKIDVLINNVGGTIWAKPYEEYEEAQIEAEVRR
SLFPTLWSCRAVLPAMIAQRRGAIVNVSSIATRSIYRVPYAASKGGVNALTASLAFEHAG
DGIRVNSVATGGTEAPPRKVPRNTAPQSEQEARWYRGIVDQTIASSLMHRYGTIDEQVGA
ILFLASDEASYITGTVLPVGGGDLG
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgatgactatgacttcgtcctacccacgcttccatgaaaaagtcgtggtcgtcaccggc
gcggcgcagggtatcggccgtggcgtcgcgctgcgcgcggccgccgaaggcgcgatcgtc
gtgctcgccgatcgcgccgaactcgtgcacgaagtggaggcggagatcgccgccctcggc
agtccttcgctcgccgtgatcgccgacctggaaacctatgccggcgcgtgcaagctgatg
cgagcggcgctcgacgccttcggcaagatcgacgtgctgatcaacaacgtgggcggcacc
atctgggccaaaccatacgaagagtatgaggaagcgcagatcgaagccgaagtgcgccgc
tcgctgttccccaccttgtggagttgccgcgcggtgttgcccgccatgatcgcgcagcgg
cgcggtgcgatcgtcaatgtatcgtcgattgccacgcgcagtatctatcgcgtgccgtat
gcggcgtccaaaggcggcgtgaacgcgttgacggccagtctcgccttcgaacatgccggc
gacggcattcgcgtgaactccgtcgccaccggcggcaccgaggcgccgccgcgcaaggtg
ccgcgcaataccgcgccgcaaagcgaacaggaagcgcgctggtatcgaggcatcgtcgat
cagaccatcgcttcgagtttgatgcaccgttacggcacgatcgacgaacaggtcggcgca
attctgtttctcgcctcggacgaagcgtcgtacatcaccggcaccgtgttgccggtaggc
ggcggcgatctcgggtag
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