Paraburkholderia dioscoreae: PDMSB3_2279
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Entry
PDMSB3_2279 CDS
T08115
Name
(GenBank) Hopanoid biosynthesis associated radical SAM protein HpnJ
Organism
pdio
Paraburkholderia dioscoreae
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
VVD28735
UniProt:
A0A5Q4ZCD7
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Position
I:complement(2359031..2360452)
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AA seq
473 aa
AA seq
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MKTLFLQAPSYDGFDGGAGSRYQAKREVRSFWYPTWLAQPAALVPDSRVLDAPADGLSVD
QTLDIAQQYDLVVIHTSTPSFPTDALFAEDLKKRKPSVLIGMVGAKVAVDPHNSLTATEA
IDFVCREEFDFTCQEVAGGKPFAQIQGLSYRAADGSIEHNEARPILENMDELPFVAPVYK
RDLKIDNYFIGYLKHPYVSIYTGRGCRSKCTFCLWPQTVGGHRYRTRSVENVLAEVKWIR
DNMPEVREIMFDDDTFTDFKPRVEEIARGLGQLGVTWSCNAKANVPYSTLKIMKENGLRL
LLVGYESGDDQILLNIKKGLRTDIARRFSDDCRKLGIKIHGTFILGLPGETQDTIQKTIE
YAKEINPHTIQVSLAAPYPGTTLYNQAVDNGWLEENKVINLVSKSGVQLAAIGYPHLSRD
EIYHQLENFYKRFYFRPSKIWEILREMLTSWDMMKRRLREGVEFFRFLRAHEA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccctgttcttgcaggcgccgtcgtacgacggcttcgatggtggcgcgggttcg
cgctatcaggccaaacgtgaagtccgctcgttctggtatcccacgtggctcgcacagccc
gccgcactcgtgcccgacagccgcgtgctcgacgcaccggcagatggtttgtcggtcgac
caaacgctggacattgcgcagcaatacgatctggtggtgatccacaccagcacgccgtcc
tttcccaccgacgccctgttcgccgaagacctgaagaagcgcaaaccgtccgtgttgatc
ggcatggtgggcgcgaaggtcgccgtcgatccgcacaattcgctgacggctaccgaagcg
atcgacttcgtctgccgcgaggaattcgacttcacctgtcaggaagtcgccggaggcaag
ccgtttgcgcagatccagggtctgagctatcgcgccgccgacggttcgatcgagcacaac
gaagcgcgcccgatcctcgagaacatggacgagctgccgttcgtcgcgcccgtctacaag
cgcgatctgaagatcgacaactacttcatcggttatctgaagcacccgtacgtgtcgatc
tacacgggccgcggttgccgctcgaagtgcaccttctgcctgtggccgcaaaccgtgggc
ggacatcgctaccgcacgcgctcggtcgaaaacgtgctggcggaagtgaagtggattcgc
gacaacatgcctgaagtcagggagatcatgttcgacgacgacaccttcaccgacttcaag
ccgcgggtcgaagaaattgcccgcggtcttgggcaactgggcgtgacgtggtcgtgcaat
gcgaaggcgaacgtgccgtactcgacgctgaagatcatgaaggaaaacggcctgcgcctg
ctgctggtcggttatgaatcgggcgacgaccagatcctgctgaacatcaagaagggtctg
cgcacggacatcgcacgccgtttcagcgacgattgccgcaaactcggcatcaagattcac
ggcacgttcattctcggtctgcccggcgaaacacaggacacgatccagaagacgatcgaa
tacgccaaagagatcaatccgcacacgatccaggtatcgctcgcggcgccgtatcccggc
acgacgctctataaccaggcggttgacaacggctggctcgaagagaacaaggtgatcaac
ctcgtgagcaaatcaggcgtgcaactggcggcgatcggctatccgcatctgtcgcgcgac
gagatttaccatcagctcgaaaacttctacaagcgtttctatttccggccgtcgaagatc
tgggaaatcctgcgggagatgctgacgagctgggacatgatgaaacggcgcctgcgcgag
ggcgtcgaattcttccgtttcctgcgcgcccacgaggcgtga
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