KEGG   Paraburkholderia dioscoreae: PDMSB3_2406.1
Entry
PDMSB3_2406.1     CDS       T08115                                 
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I, NADP-dependent
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
pdio  Paraburkholderia dioscoreae
Pathway
pdio00250  Alanine, aspartate and glutamate metabolism
pdio00310  Lysine degradation
pdio00350  Tyrosine metabolism
pdio00650  Butanoate metabolism
pdio00760  Nicotinate and nicotinamide metabolism
pdio01100  Metabolic pathways
pdio01120  Microbial metabolism in diverse environments
Module
pdio_M00027  GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:pdio00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    PDMSB3_2406.1 (gabD)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    PDMSB3_2406.1 (gabD)
   00310 Lysine degradation
    PDMSB3_2406.1 (gabD)
   00350 Tyrosine metabolism
    PDMSB3_2406.1 (gabD)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    PDMSB3_2406.1 (gabD)
Enzymes [BR:pdio01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     PDMSB3_2406.1 (gabD)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     PDMSB3_2406.1 (gabD)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     PDMSB3_2406.1 (gabD)
SSDB
Motif
Pfam: Aldedh DUF1487
Other DBs
NCBI-ProteinID: VVD33690
UniProt: A0A5Q4ZR87
LinkDB
Position
II:complement(2496331..2497812)
AA seq 493 aa
MSTARFGTAVALKDESLVKNSCFIDGEWTGADSGDVIEVNNPATGEVLGTVPKMGAAETR
RAVEACDRALPEWRSKTGKERAAILRRWYELMLENQDDLAVIMTAEQGKPLSESRGEIGY
AASFLEWFAEEGKRVYGDTIPAHARDKRIIVLKQPIGVCAAITPWNFPAAMLTRKIGPAL
AAGCTMVLKPASQTPFSALALCVLAERAGMPKGVIACVTGAASAIGGELSSNPIVRKLSF
TGSTEVGKLLLAQCASTVKKASMELGGNAPFIVFDDADLDAAVMGAIASKYRNAGQTCVC
ANRLLVQDGVYDEFVERLAREVLKLKVGNGLETGTLVGPLIDHKAVAKVEEHVSDAVAKG
ATVVLGGKKHAAGENFYEPTILSGTTPDMLIFREETFGPVAPVFRFSTDEDAIRLANDTE
FGLASYFYSRDIARVWKVAEALEYGIVGINEGLISTEVAPFGGVKESGLGREGSKYGIDD
YLELKYLCIGGVQ
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgtcgactgcacgatttggtactgccgttgctctgaaagacgagagtctggtaaaaaat
tcctgctttatcgatggcgagtggaccggtgccgatagcggcgacgttatcgaggtcaat
aatcccgccaccggcgaagtgctgggcaccgtgccgaagatgggggccgccgaaacccgc
cgcgcggtcgaggcctgcgatcgggcgttgcctgaatggcgctcgaaaacaggtaaggag
cgcgctgccatcctgcggcgctggtacgagctcatgctggagaatcaggatgatcttgcg
gtcatcatgaccgcagagcagggcaagccgctctctgagagccgaggtgaaattggctac
gcggcgtcgtttctcgaatggttcgcggaagaaggcaagcgtgtctacggcgacactatc
cccgctcatgcgcgagataagcgcattatcgttttgaagcaacccatcggggtttgcgca
gcgattacgccgtggaacttcccggcggcgatgttgactcgcaagatcggtcctgctctc
gcggccggctgcacaatggtcctgaaacccgccagtcaaacgccgttctcggcgctcgcc
ctgtgcgtgttggccgaacgcgccggcatgccgaagggcgtcattgcctgcgtaaccggt
gcggctagtgctatcggcggtgaactttcgagcaatcccattgtgcgcaagctgtccttt
accgggtcgactgaagtgggcaagcttctattggcgcagtgtgcgagcacggtgaagaag
gcgtctatggagttaggtggcaacgctcccttcatagtattcgacgacgcggatctcgat
gcggctgtgatgggcgccatcgcgtccaagtatcgcaatgcaggccagacgtgtgtgtgt
gcgaatcggctgcttgtgcaggatggcgtgtacgacgaattcgtggaaagacttgctcgg
gaggtgttgaagctcaaggtcggcaacggattggagaccggaacgcttgtcgggccgctt
atcgaccataaggcggtcgcaaaggtcgaggagcatgtgtcggatgccgttgcaaaaggc
gccacggtcgtgctcggtggaaagaagcatgcggctggcgagaacttctacgaaccaaca
atcctttccggcaccacgccggacatgctcattttccgtgaagagacgttcggaccggtc
gcgcctgtgttccgcttctctacggacgaagatgcgatccggttggccaacgatacggaa
tttggcctcgcgtcctacttttatagccgggacatcgcgcgggtctggaaggtcgctgaa
gcgcttgaatacggcatcgtaggcatcaacgaggggctgatatcgacggaggtcgcgccg
tttggtggcgtaaaagaaagtggcttgggtcgtgaaggttcgaagtacggcatcgatgac
tacctcgaattgaagtacctctgtatcggcggcgtgcagtaa

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