Paraburkholderia dioscoreae: PDMSB3_2472
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Entry
PDMSB3_2472 CDS
T08115
Symbol
clpB
Name
(GenBank) Chaperone protein ClpB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pdio03110
]
PDMSB3_2472 (clpB)
Chaperones and folding catalysts [BR:
pdio03110
]
Heat shock proteins
HSP100
PDMSB3_2472 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
AAA
ClpB_D2-small
AAA_5
AAA_22
Sigma54_activat
NBD_SMAX1
nSTAND3
AAA_16
RuvB_N
AAA_18
AAA_7
AAA_28
AAA_14
Zeta_toxin
IstB_IS21
TniB
RsgA_GTPase
DUF815
NACHT
TsaE
AAA_25
ABC_tran
AAA_3
T2SSE
ABC_tran_CTD
AAA_33
DNA_pol3_delta2
Torsin
Motif
Other DBs
NCBI-ProteinID:
VVD28928
UniProt:
A0A5Q4YVK3
LinkDB
All DBs
Position
I:2549193..2552078
Genome browser
AA seq
961 aa
AA seq
DB search
MAEHLCELCGVRPATIRVAVIQGGRRRQLDVCDYHYAQLTRHQRQVSPLESLFRGGLFDG
LLDSGTDGFGAEPAATRHDGPVNKGVDLQQHFSEQAKEILQRAAERAVQFGRHEVDTEHV
LYELVESEAVQRILSALKISASDLQKHIEANAPKGHVTSKAPQGEISVSPRLKSALERAV
IASREFGQNYVGPEHILTGLAEVTDSFAGDLLMKYGLSPHLLRQQTLKQAGQEEAAQAPS
DTPQLDKYSRDITRLAREGKLDPVIGRSKETETLVEVLARRKKNNPVLIGEPGVGKTAIV
EGLALRMISGDVPETLREKRLIELNVNSLVAGSKYRGEFEERVKQVMDEIAAHKDRLVLF
VDEVHTIVGAGQGGGEGGLDIANVFKPPMARGELNLIGATTLAEYQKYIEKDAALERRFQ
PVLVGEPSVEQTIGILRGLRDRLEAHHKVTILDEACVAAAELSDRYITGRFLPDKAVDLI
DQAAAREHLSSTSRPAEVLELESEIAQIRREQEYATSHKQFERAKALGEQLSGKQTQLDD
STEAWKRRVSTSTAEVTRTLVAEIVAKMTGIPVADLTQEEKTKLLQMEDRLHRRVIGQEE
AISAVSDAVRRSRAGLQARHQPLAVFLFLGPTGVGKTELAKALAEVVFGDEDAIVRIDMS
EYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPHSVILLDEIEKAHPDVYNVLLQVFD
DGRLTDGKGRVIDFANTLIIATSNLASDVITGTPRKRPGFIAADNDIVAGKSPRKDRQPD
GVREGVMTVLRSHFRPEFLNRIDEIIIFESLNADQIRSIVRLQLDKVAHIAKSQDIDIVF
DDSIVDQLAKEAYRPEYGARELRRRIRQVIENPLAKQMLDGAVREGNRVVCRFDPLQDDT
VFELSEAPQQELAGTTQQDKQKDPDAGNGAADTGPAAKPARKRASPARKRGNTDGGDHAA
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacatctgtgcgaactttgcggcgtcaggcctgcgaccatccgggtcgcggtc
attcagggcggacgcagaaggcaactcgatgtttgcgactatcactacgcgcagctcacg
cggcatcaacgacaggtgtcgccgctcgaatcgctgtttcggggcggcctgttcgacgga
ttactggactcgggcacagacggcttcggcgctgaaccagccgccacgcgtcacgacggc
ccggtgaacaaaggcgtcgacctgcaacagcatttcagcgagcaggcgaaggaaatactg
caacgtgccgccgaacgcgccgtgcaattcggccgccatgaggtggacaccgaacacgtg
ctttatgaactcgtcgaaagtgaagcagtacagcgcattctgtcggcgctgaagatctcc
gccagcgatcttcaaaagcatatcgaagcaaacgcgccaaaggggcacgtcacgtccaaa
gcgccgcaaggcgagatctccgtttcgccacgcctgaaaagtgcgctcgaacgcgccgtc
atcgcgtcgcgcgaattcggacagaactacgtcggccccgaacacattcttaccggcctc
gccgaggtcaccgacagttttgccggcgatctgttgatgaagtacggcctgtcgcctcac
ctgttgcgtcagcagacgctgaagcaggccggccaggaagaagccgcgcaagctcccagc
gacacgccgcagctcgacaaatatagccgcgacatcacgcggctcgcccgtgaaggcaag
ctcgatccggtcattggacgatcgaaggaaacagagacgctcgtcgaggtgctcgcccgg
cgcaaaaagaacaaccccgtgctgatcggcgagcccggcgtcggcaagacggcgattgtg
gaaggactcgcgctgcgcatgatcagcggcgacgtgccggaaacattgcgcgaaaagcgc
ctgatcgaactcaatgtcaactcgctggtcgcgggctcgaaataccgtggcgaattcgag
gaacgcgtcaagcaggtgatggacgaaatcgccgcgcacaaggatcggctggttctcttc
gtcgacgaagtgcacaccatcgtcggtgcgggccagggcggcggcgaaggcggcctggat
atcgccaatgtgttcaagccgccgatggcgcgcggcgagctcaatctgatcggcgcgacc
acgctcgccgaataccagaagtacatcgagaaagacgccgcgctggaacggcgcttccag
ccggtgctggtcggcgagccgagcgtggagcagactatcggcattctgcgggggctgcgc
gaccgtctggaagcgcaccacaaggtcacgattctggatgaagcgtgcgtggccgccgcc
gaactgtccgaccgctacattacgggccgcttcctgccggacaaggccgtcgacctgatc
gaccaggcggccgcgcgcgagcatctgtcatccacatcccgcccggcggaggtgctggaa
ctcgaatcggaaatcgcccagatccggcgcgagcaggaatacgcgacgtcgcacaaacag
ttcgaacgggcgaaggcgctcggagaacaactgtcaggcaagcaaacccagctcgacgac
tcgaccgaggcatggaagcggcgtgtgagcacgagcaccgcggaggtgacccgtacgctg
gtcgccgagatcgtcgcgaaaatgacgggcattccggttgccgacctgacgcaggaggag
aaaaccaaactgctgcaaatggaggaccgcctgcaccggcgcgtgatcggccaggaagaa
gcgatcagcgcggtaagcgatgcggtgcggcgaagccgcgcgggtttgcaggcccgccat
cagccgcttgccgtgtttctgttcctcggcccgaccggcgtcggcaagaccgaactggcg
aaggcgctcgccgaagtcgtattcggcgacgaggacgccattgtgcgtatcgacatgagc
gagtacatggagcggcacgcggtggcgcgactgatcggtgcgccgcccggctatgtcggc
tacgacgaaggcggccagttgaccgagcgcgtgcggcggcgtccgcatagcgtgattctg
ctcgacgaaatcgaaaaagcgcatccggacgtctacaacgtgctgctgcaggtattcgac
gacggccgcctgaccgacggcaagggccgcgtcatcgacttcgccaatacgctgatcatc
gcgaccagcaacctcgcctccgacgtcatcacgggcacgccgcgcaagcgtcccggcttc
atcgcggcggacaacgacatcgttgccggcaagagcccccgtaaggaccggcagcccgac
ggcgtgcgcgaaggtgtgatgacagtgctgcggtcacatttccgccccgagttcctgaac
cgtatcgacgagatcatcattttcgagtcgctcaacgccgaccagatccgttcgatcgtg
cgcctgcaactcgacaaggtggcgcacatcgcgaagagtcaggacatcgacatcgtgttc
gacgacagtatcgtcgatcaactggcgaaggaggcttaccggcccgaatacggcgcgcgt
gaactgcggcggcgcattcgccaggtcatcgaaaatccgctcgcaaagcagatgctcgac
ggcgcggtccgcgagggcaaccgggtggtgtgccggttcgatccgctccaggacgatacg
gtgttcgaactgagcgaagcaccgcagcaggagctcgccggcacaacgcagcaggacaaa
cagaaagacccggacgccggcaatggtgcggccgacaccgggccggccgccaaacccgcg
cgcaagcgtgccagcccggcgcgcaagcgcggcaacacggacggcggcgaccacgccgcg
ggataa
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