Paraburkholderia dioscoreae: PDMSB3_2500
Help
Entry
PDMSB3_2500 CDS
T08115
Name
(GenBank) putative exonuclease of the beta-lactamase fold involved in RNA processing
KO
K07576
metallo-beta-lactamase family protein
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99974 Translation
PDMSB3_2500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Lactamase_B_6
Anti-Pycsar_Apyc1
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
VVD28956
UniProt:
A0A5Q4ZM50
LinkDB
All DBs
Position
I:2577666..2579129
Genome browser
AA seq
487 aa
AA seq
DB search
MKLTFLGAAETVTGSRYLLDGAGLRILIDCGLFQGTKNQRLRNWNPLPIDVGTLDAVILT
HAHLDHSGYLPVLVRMGYRGPVYCTRGTRDLCQVMLRDSARLQEEEAAYANRHGLSKHHP
ALPLYTLEDAEKALELLEPRDFDVPKQLNDHACFRLLPAGHILGAAGVVLCVEGKVIAFS
GDLGRPDDPIMRAPMPLAHADYLIVESTYGDRLHDKTDPAAELAELFATTFRRGGVVVIP
CFAVGRAQSILHYIAQLKATGRMANVPVFLDSPMATSVTQLYRHHVSEHRLSSTEANAIS
NAAQMVHTVDESKAILSLNGPRVIIAGSGMATGGRVLHHLKAFAPDPRNTIALVGYQAAG
TRGAALAAGAPTIKIHGDYVRVRASVVSLSSLSAHADYAEILSWLRSIPQPPQRTFVTHG
EPAAADAMRRHIEETYHWRCEVPLYLETVELPGSVGNVGVDPCVAVANATTSRSVLARVV
ASDRATG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacctttctcggcgcggccgaaaccgtcaccggctcgcggtatctactggac
ggcgcggggctgaggattctgatcgactgtggtctgtttcagggcaccaagaaccagcgc
ctgcgtaactggaatccgttgcccatcgacgtcggcacgctggatgccgtgatcctgacc
cacgcacatctggatcacagtggctacctgccggtactcgtacgcatgggctatcgcgga
cctgtctattgcactcgcggcacccgtgacctgtgccaggtcatgctgcgcgatagcgcc
agactgcaggaagaagaagccgcgtacgcgaaccgccacggcttgtcgaaacatcatccg
gcgctgccgctctacaccctggaagatgcggaaaaagcccttgaactgctcgaaccgcgc
gatttcgacgtgccgaaacaattgaacgaccatgcgtgtttccgcctgctgccggccggg
cacattctcggcgccgcgggcgtggtgctgtgcgtggaaggcaaggtcatcgccttttcg
ggcgacctcgggcggccggacgacccgatcatgcgcgcgcccatgccgctcgcccatgcc
gactacctgatcgtcgaatccacctacggcgaccggttgcacgacaaaaccgatcccgcc
gccgaactggctgaactcttcgcgaccactttccggcgcggcggcgtagtcgtgattccc
tgtttcgcggtggggcgcgcgcaatcgattcttcattacattgcccaactgaaagccacc
ggccggatggcgaacgtgccggtctttctcgacagcccgatggcgacgagcgtcacgcaa
ctctaccggcatcacgtcagcgaacaccggctgagctcgaccgaagccaacgcgatcagc
aacgccgcgcagatggtgcacaccgtcgacgaatccaaggcgattctgagcctgaacggc
ccgagggtgatcatcgcgggcagcggcatggctaccggcggccgggtcttgcatcacctg
aaggccttcgctccggatcctcgcaacacgatcgcactggtcggctaccaggcggccggc
acgcgcggcgccgcgctcgccgccggcgcaccgacgatcaagattcacggcgactatgtg
cgcgtgcgcgcttcggtggtgagcctgtcgtccttgtcggctcatgcggattacgccgag
atactgtcgtggctgcgctccattccgcaaccgccgcagcgcacgttcgtcacgcacggc
gagccggccgccgccgatgcgatgcgccgtcacatcgaggaaacgtatcactggcgctgc
gaagtgccgctctatctcgagaccgtcgaattgccggggtcggtgggcaatgtaggcgtg
gatccgtgtgtcgccgtcgcgaatgcaacgacctcacgcagcgtgctggcgcgcgtggtt
gcaagcgaccgggccaccggataa
DBGET
integrated database retrieval system
