Paraburkholderia dioscoreae: PDMSB3_2561.1
Help
Entry
PDMSB3_2561.1 CDS
T08115
Symbol
cdhR
Name
(GenBank) HTH-type transcriptional regulator CdhR
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdio03000
]
PDMSB3_2561.1 (cdhR)
Transcription factors [BR:
pdio03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PDMSB3_2561.1 (cdhR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
HTH_11
Zn_ribbon_LapB
Motif
Other DBs
NCBI-ProteinID:
VVD33845
UniProt:
A0A5Q4ZJZ5
LinkDB
All DBs
Position
II:complement(2647823..2648815)
Genome browser
AA seq
330 aa
AA seq
DB search
MPEDMSFLLLPGYSAIGFMSAVEPLRVANRFQGDLYRWRILSLDGAPVAASNGISINADA
AIGDVGAAQTLFVVAGFEPLACYTRALGDCLKRFDRAGATLGGIDTGSFVLAEAGLLGSA
DSVTVHWEALSAFRERYPSLDASQELFEIGARRITCAGGTASIDMMLDLIGREHGAALAS
AVSEQFVVSRIRQRSDHQRMEIAARYGVHNRKLIQVIGVMEQHMEEPLTPDRLAQEIGVT
RRQLERLFCALLKDTPTHFYQQLRLARARELLQQTDMSITSICVACGFESPSHFSRTYRA
RFGASPRSDRQPCMDPRRGVEAQLSRLPQQ
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagatatgtcgttcctcctgctgccgggctattcggcgatcggcttcatgtcg
gcggtggagccgttgcgcgtggcgaaccgctttcagggcgatctgtaccgctggcgcatt
ctgagtctcgacggcgcgccggtggccgccagcaacggcatttccatcaatgccgatgcg
gccattggcgacgtgggcgcggcgcaaacgctgttcgtcgtcgcggggttcgagcctctc
gcctgctatacgcgcgcgctgggtgattgtctgaagcgcttcgaccgcgcgggggcgacg
ctcggcgggatcgacaccggcagcttcgtgctcgcggaagccgggctgttggggagcgcg
gacagtgtgaccgtgcactgggaagcgctgtcggcgtttcgcgagcgctatccgtcgctg
gacgcgagtcaggaactgttcgaaatcggcgcgcggcgcattacgtgtgcgggcggcacg
gcgtcgatcgacatgatgctcgacctgatcgggcgcgagcatggtgccgcgctggcctcg
gcggtctcagagcaattcgtggtgagccggatccgccaacgctcggatcatcagcgcatg
gagattgccgcacgttatggcgtgcacaaccgcaagctgattcaggtaatcggcgtgatg
gaacagcatatggaagaaccgctgacgccggatcggctcgcgcaggagatcggcgtgacg
cggcggcaactggagcggctcttctgcgctttgctgaaggacacgccgacgcatttctac
cagcagttgcgtctcgcgcgtgcgcgcgagttgctgcaacagaccgacatgtcgattacg
tcgatttgtgtggcgtgcggattcgagtcgccctcgcacttttcgcggacgtatcgcgcg
cgcttcggcgcgagcccgagaagcgaccggcagccttgcatggatccgcgtagaggcgtt
gaagcgcaattgtcccgtttaccgcaacagtga
DBGET
integrated database retrieval system
