Paraburkholderia dioscoreae: PDMSB3_2597
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Entry
PDMSB3_2597 CDS
T08115
Name
(GenBank) Pseudouridine synthase family protein (fragment)
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdio03009
]
PDMSB3_2597
Enzymes [BR:
pdio01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
PDMSB3_2597
Ribosome biogenesis [BR:
pdio03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PDMSB3_2597
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
TruB_N
Motif
Other DBs
NCBI-ProteinID:
VVD29053
UniProt:
A0A5Q4ZE19
LinkDB
All DBs
Position
I:2675377..2676108
Genome browser
AA seq
243 aa
AA seq
DB search
MSELGLCSRREADEWIEKGWVLVDGERIDTLGTKVRPDQRIEIDPAAEAAQASQVTVLIH
KTVGFVSGQAEDGYQPAITLVTPENRWEGDRSNIRFSVAHLRQLAPAGRLDIDSTGLLVL
TQDGRIAKQLIGGHSEIDKEYLVRVAFGEHTTEVESHFPPESLALLRHGLSLDDVPLKPA
QVSWQNGEQLRFVLREGKKRQIRRMCELVGLEVIGLKRVRMGHVMLGALPPGQWRYLAAD
ESF
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaactcggcttgtgctcgcgccgcgaagccgacgaatggatcgagaaaggctgg
gtgctggtggacggcgagcgcatcgacacgctcggcaccaaggttcgtccggaccagcgt
atcgagatcgaccctgccgccgaagccgctcaagccagccaggtgaccgtgctgatccac
aagacggtgggtttcgtctccggtcaggcggaagacggttaccagccggccatcacactg
gtcacgccggaaaaccgctgggaaggcgatcgctcgaacatccgcttctccgttgcgcat
ttgcgccagcttgcgccggccgggcggctggacatcgactcgacgggcctgctggtgctg
acgcaggacggccgtatcgcgaagcagttgatcggcggccattcggagatcgacaaggag
tatctcgtgcgcgtggcattcggcgagcacacgaccgaggtcgaaagccacttcccgccg
gaaagcctcgcgctgctgcggcatggcctctcgctcgacgacgtaccgctcaagccggca
caggtcagttggcagaacggcgagcaattgcgttttgtgctgcgtgaaggcaagaagcgt
cagattcgccgcatgtgcgaactggtcggcctcgaagtgattggcctgaagcgtgtgcgg
atgggccatgtgatgctgggcgcgttgccgccgggccaatggcgctacctcgcagccgat
gaatcgttctga
DBGET
integrated database retrieval system
