KEGG   Paraburkholderia dioscoreae: PDMSB3_2616
Entry
PDMSB3_2616       CDS       T08115                                 
Symbol
radA
Name
(GenBank) repair protein radA homolog
  KO
K04485  DNA repair protein RadA/Sms
Organism
pdio  Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:pdio00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdio03400]
    PDMSB3_2616 (radA)
DNA repair and recombination proteins [BR:pdio03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     PDMSB3_2616 (radA)
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB AAA_16 DnaB_C AAA_22 GvpD_P-loop ChlI AAA_24 Lon_C SLFN-g3_helicase Rad51 Zn_Ribbon_YjdM AAA_14 nSTAND3 RecA DUF7125 MCM AAA_5 NACHT NTPase_1 CobU ABC_tran KdpD AAA_29
Other DBs
NCBI-ProteinID: VVD29072
UniProt: A0A5Q4ZE98
LinkDB
Position
I:complement(2700179..2701555)
AA seq 458 aa
MAKPKTVYICSECGGQSPKWAGQCPSCNAWNTLVESVAEAPSTHRFQSLAKSAPVRRLAD
IEASDIPRFTTGVSEFDRVLGGGLVPGGVVLIGGDPGIGKSTLLLQSLAEIAADKRALYI
SGEESAAQIALRAQRLSLLEPGSKASELQLLAEIQLEKIQATIAEQRPDVAVIDSIQTVY
SDALTSAPGSVAQVRECAAQLTRIAKQSGTTIIMVGHVTKEGALAGPRVLEHIVDTVLYF
EGDTHSSYRLVRAIKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQSVPGSCVLVT
QEGTRPLLVEVQALVDAANAPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVFLNAV
GGVKITEPAADLAVLLAIHSSMRNKPLPKGLVVFGEVGLAGEIRPSPRGQERLKEAAKLG
FSVAVIPKANAPKQPIEGLQVVAVERIEQAIDRVRTLE
NT seq 1377 nt   +upstreamnt  +downstreamnt
gtggctaaacccaagacggtgtacatctgtagtgaatgcggcgggcaatcgccgaaatgg
gccggccagtgcccctcgtgcaatgcgtggaacacgctggtcgagtcggtggcggaagcg
ccttccacgcatcgtttccagtcgctcgcgaagagcgcgccggtgcgccgtctcgccgat
atcgaagcgtccgacataccgcgcttcaccaccggcgtgagcgagttcgaccgcgtgctg
ggcggcggtctggtgccgggcggcgtggtgctgatcggcggcgatccgggcatcggcaaa
tcgacgctgttgctgcaatcgctcgcggaaatcgccgccgacaaacgcgcgctctatatc
agcggcgaagaatccgctgcgcagattgcgttgcgcgcgcaacgactttcgttgctggag
ccgggctcgaaggcgagcgagctgcaactgctggcggaaatccagctggaaaaaatccag
gcgacgatcgccgaacagcgacccgatgtcgcggtgatcgactcgatccagacggtctat
tccgacgcgctgacttccgcgccgggctcggtcgcccaggtgcgcgagtgcgccgcgcag
cttacacggatcgccaagcagtcgggcaccaccatcatcatggtcggccacgtgactaag
gaaggcgcgctggcggggccgcgcgtgctcgaacacatcgtcgacacggtgttgtacttc
gagggcgacacgcattcgtcgtaccgtctggtgcgcgcgatcaagaaccgcttcggcgcg
gtcaacgaactcggcgtgttcgccatgaccgagcgcggcttgcgcggcgtggccaatccg
tcggcgctgtttctgtcgcagcacgagcagtcggtgccgggttcctgcgtgctggtgacg
caggagggcacgcggccgctgctggtcgaagtgcaggcgctcgtggacgccgccaacgcg
ccgaatccgcggcgcctcgcggtcggtctggaacagaaccggctcgcgatgctgctggcg
gtgctgcatcgtcacgccggcatcgcctgtttcgatcaggacgtgttcctgaacgccgtg
ggtggggtgaagattaccgagcccgctgccgacttggccgtgctgctcgcgatccattcg
tccatgcgcaacaagccgctgcccaagggcctggtggtgttcggagaagtgggcctcgcc
ggcgaaatccggccgtcgccgcgcggtcaggaacgtttgaaggaagccgccaaactgggc
ttttccgtcgcggtgattcccaaggccaatgcgccaaagcagccgatagaaggcttacag
gtcgttgcggtcgagcggatcgaacaggccatcgaccgggtccgcacgctcgaatag

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