Paraburkholderia dioscoreae: PDMSB3_2626.1
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Entry
PDMSB3_2626.1 CDS
T08115
Name
(GenBank) Transcriptional regulator with HTH domain and aminotransferase domain
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdio03000
]
PDMSB3_2626.1
Transcription factors [BR:
pdio03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PDMSB3_2626.1
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
HTH_24
HTH_36
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
VVD33910
UniProt:
A0A5Q4ZRL6
LinkDB
All DBs
Position
II:complement(2716936..2718408)
Genome browser
AA seq
490 aa
AA seq
DB search
MEIHIAVEGHHDLSGQIYRQLRAGILEGRLAGGTRLPSTRDLATQLGVSRKTTLDVFERL
LSEGYLSARAGSGTFVADGLERLPVERSSHARAVESSRERVRAKTAARAQPLWEDMPERL
ALPRPLALLPQDFVGGATDKTLFPFEVWRRCVNRALRAQSRGPGTYRDAAGEQELRLAIS
RYLAFNRAVASNWEDVIVTQGAQHALDLLARISLRAGEVAAIEDPGYSPAHACLKATGAR
VVPVPVDAEGLIVSKLPDKARLVYVTPSHQFPLGMPMSLERRVELLEWAQKRGAVIIEDD
YDCEYRFEGRAMEPLKSLDRAGLVAYVGTFSKTIFPELRVGYVVPPASLYGPLLKARQIT
DWHGCTLTQTALASFMLNGDFAKHLRRMHKIYAARRAMLLAHLHGGLAPWFEPIVPTAGI
HMAARLKAPLTEQALVSAAREASIGLYGLAAFHLRVKAQPGLIFGYGNIAVEDIDAALTK
LAGILPRLVQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccatatcgcggtcgaagggcatcacgatctgtccggacagatctatcggcaa
ttgcgcgccggcattctcgaagggcgccttgccggtggcacgcgcctgccgtccacgcgc
gatctcgccacgcaactgggcgtttcgcgcaagaccacactcgacgtattcgagcggctg
ctctccgaaggctatctcagcgcccgtgccggctcgggcactttcgttgccgacggcctg
gagcgtttgccggtggagcgctcctcgcatgcgcgggcggtggaatcgtcgcgcgagcgg
gtcagggcgaagaccgccgcgcgcgcgcagccgctgtgggaagacatgcccgagcgcctg
gcgttgccgcggcctttggcgctgttgccgcaggacttcgttggcggcgcgacggataag
acgctgtttcccttcgaggtctggcgccgctgcgtgaatcgtgcgttgcgcgcgcaatcg
cgcggccccggcacatatcgcgatgcggccggcgagcaggagttgcgcctcgcgatctcg
cgctacctggccttcaaccgcgcggtggcgagtaactgggaagacgtgatcgtgacgcaa
ggcgcgcagcacgcgctcgatctgcttgcgcgcatcagcttgcgtgcaggcgaagtcgcg
gcgatcgaggatcccggttattcgccggcccatgcgtgcctgaaggccaccggcgcgcgc
gtggtgcccgtgccggtggatgcggaaggcctgatcgtgagcaagctgccggacaaggcg
cggctcgtctacgtgacgccttcgcatcagtttccgctcggcatgccgatgagtctggag
cgccgcgtcgaattgctcgaatgggcgcagaagcgcggcgcggtgatcatcgaagacgac
tacgactgcgagtaccgctttgaaggccgggcgatggagccgctgaaaagcctcgaccgc
gccggcctcgtggcgtacgtgggcacgttttcaaagacgatctttcccgaactgcgggtc
ggctacgtcgtgccgccggcctcgctctatggtccgctgctcaaggcgcgccagatcacc
gactggcacggctgcacgctcacgcaaaccgcgctcgcgtccttcatgctcaacggcgac
ttcgccaagcacctgcggcgcatgcacaagatctacgcggcgcgccgcgcgatgctgctc
gcccatttgcacggcggcctcgcgccctggttcgaaccgatcgtgcccacggccggcatc
catatggcggcgcgcctgaaagcgccgctgacggagcaggccctggtgagcgcggcgcgt
gaagcatcgatcggcttatatgggctcgcggcttttcatctgcgcgtcaaggcgcagccg
ggcctgatcttcggctacggcaatattgcagtcgaggatatcgatgcggcgctcacgaag
ctcgccggcattctcccgcggctcgtgcaataa
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