Paraburkholderia dioscoreae: PDMSB3_2630.1
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Entry
PDMSB3_2630.1 CDS
T08115
Symbol
oppA
Name
(GenBank) oligopeptide transporter subunit; periplasmic-binding component of ABC superfamily
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio01501
beta-Lactam resistance
pdio02010
ABC transporters
pdio02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PDMSB3_2630.1 (oppA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PDMSB3_2630.1 (oppA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PDMSB3_2630.1 (oppA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdio02000
]
PDMSB3_2630.1 (oppA)
Transporters [BR:
pdio02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
PDMSB3_2630.1 (oppA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
VVD33914
UniProt:
A0A5Q4YYF5
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All DBs
Position
II:2721792..2723408
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AA seq
538 aa
AA seq
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MKTPFVYATALTALVLTFAPSAFAVNVPAGVTLAASQEITRQVPAETESLDPAHIESWTG
NTIALDLFEGLTRIDATGAVVPGVAQSWTRTGPDTWVFKLRHDARWSNGQPVTAADFIYA
WQRVLDPKTGSKYTVLVEFVKNAKAILAGKAPLTSLAARAVDPYTLEVTTEVPAAFFPQL
AAMPTMAPVNRDVVTKFGGEWTRPGNFVGNGPYMLTDWQPSNRLVGTKSKTYWNAGKVVI
TKVTYLPIENDETAMRMYQAGQFDYTYSIPSGIYAQVSRQFGSELKTGLQIATYYYSLNN
EDPLFKDKRVRQALSMVLDRDLLTQRLTADGELPMYGLISKGTQGAAVFKPDWSTWPMPK
RVDYARNLLKQAGYSETKPLTFTLTYNTNDLHKKVALFATSEWRTKLGVNAKLENVEYKV
LLKQRHDGKVQASRDGWFVDYNDAMSYFDLIRCNSVQNDQRYCNPQVDKLVDQANQQLDD
AKRTALLTQAHDMAMNDYPLVPLFQYSADRLVKPYVGGYTSTNYVDQRATQDMYLIKH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccccgttcgtctacgcgacggcgctaaccgcgctcgtcctcacgtttgccccg
tccgcttttgccgtcaacgtgccggccggcgtcacgctcgccgcgagccaggaaatcacc
cggcaggtgccggctgaaaccgaatcgctcgaccccgcgcatatcgaatcgtggaccggc
aatacgatcgcgctcgacctgttcgaaggcctgacgcgcatcgacgcgaccggcgcggtg
gtgccgggcgtcgcgcaatcgtggacgcgcaccgggcccgatacgtgggtgttcaagctg
cgccacgatgcgcgctggagcaacggtcagccggtcacggcagcggacttcatctatgca
tggcagcgcgtgctcgatccgaagaccggctcgaagtacaccgtgctggtcgaattcgtg
aagaacgccaaggcgattctcgccggcaaggcgccgctcacgagcctcgccgcgcgcgcc
gtcgatccgtacacgctggaagtcactaccgaagtgcccgccgccttcttcccgcaactg
gccgccatgccgaccatggcgccggtcaaccgcgacgtcgtgacgaagttcggcggcgag
tggacccggccgggcaacttcgtcggcaacgggccttacatgctgacggactggcagccg
agcaaccgtctggtgggcacgaagagcaagacgtactggaacgccggcaaggtcgtgatc
acgaaagtgacctacctgccgatcgaaaacgacgaaacggccatgcgcatgtatcaggct
ggtcagttcgactacacgtattcgatcccctccggcatctatgcgcaggtgagcaggcag
ttcggctccgaactgaaaaccggcctgcagatcgccacttactactacagcctgaataac
gaagacccgctgttcaaggacaagcgcgtgcgccaggcactctcgatggtgctcgaccgc
gacctgctgacccagcgcctcaccgcggacggcgaactgccgatgtacggcctgatttcc
aagggcacgcaaggggcggccgtcttcaagcccgactggtccacgtggccgatgcccaag
cgcgtggactacgcccgcaatctgctgaagcaggccggttattcggagaccaagccgctc
acgttcacgctgacctataacaccaacgacctgcacaagaaggtggcgctcttcgccacc
tccgaatggcgcaccaagctcggcgtgaacgcgaaactggagaacgtcgaatacaaggtg
ctgctcaagcagcgccacgacggcaaggtgcaggcctcgcgcgatggctggttcgtcgac
tataacgacgccatgtcgtatttcgatctgatccgctgcaacagcgtgcagaacgatcag
cgctactgcaacccgcaagtggacaaactggtcgatcaggccaaccagcagctcgacgac
gcgaagcgcaccgccctgctcacgcaggcacacgatatggcgatgaacgactacccgctg
gtgccgctcttccagtactcggcggaccggctggtgaagccgtatgtgggcggctacacg
tcgaccaactacgtcgatcagcgcgccacgcaagacatgtatctgatcaagcactaa
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