Paraburkholderia dioscoreae: PDMSB3_2634.1
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Entry
PDMSB3_2634.1 CDS
T08115
Symbol
oppF
Name
(GenBank) oligopeptide transporter subunit; ATP-binding component of ABC superfamily
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio01501
beta-Lactam resistance
pdio02010
ABC transporters
pdio02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PDMSB3_2634.1 (oppF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PDMSB3_2634.1 (oppF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PDMSB3_2634.1 (oppF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdio02000
]
PDMSB3_2634.1 (oppF)
Transporters [BR:
pdio02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
PDMSB3_2634.1 (oppF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_29
nSTAND1
RsgA_GTPase
SMC_N
ATP-synt_ab
NACHT
AAA_16
NB-ARC
MMR_HSR1
AAA
AAA_25
Sigma54_activat
AAA_5
Motif
Other DBs
NCBI-ProteinID:
VVD33918
UniProt:
A0A5Q4ZP27
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All DBs
Position
II:2726278..2727324
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AA seq
348 aa
AA seq
DB search
MNATPIANQDAATLLRVDNLKVQFGVPRGGFPWSGKATLRAVDGVSFNVRRGETVGLVGE
SGCGKSTLARAIIGLAPVASGSVRWLGDETVLPGARRDTSRLRRDVQMIFQDPLASLDPR
MTIEQIIAEPLTTHGQDIARADVQRRVLTILERVGLNAQHLRRYPHEFSGGQCQRVGIAR
ALIGEPQLVICDEPVSALDVSIQAQIVNLLRDLQRELSLSLLFVAHDLAVVKAISHRVLV
MYLGRVMEFGDKREVYGTPRHPYTRALLSAVPVPDPVVERARRHLLLRGEIASPLNPPSG
CAFRTRCPDAIEACGEEIPQPVTHGANATRVACIRVVDAPQEAFSAHR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccacgcctatcgcgaatcaggacgcagcaacgttgctccgcgtcgacaatctc
aaggtgcaattcggcgtgccgcgcggcggctttccgtggtccggcaaagcgacgctgcgc
gcggtggacggcgtgtcgttcaacgtgcggcgcggcgaaaccgtgggccttgtcggcgaa
tcgggttgtggcaagtcgacgctcgcgcgcgcgatcatcgggctcgcacccgtggcgagc
ggcagcgtgcgctggctcggcgacgaaaccgtgctgccgggtgcgcgccgcgatacatcg
cgtttgcgccgcgacgtgcagatgattttccaggatccgctcgcctccctcgatccgcgc
atgacgatcgaacagatcatcgccgaaccgttgacgacgcacggccaggacatcgcgcgc
gccgatgtgcagcggcgcgtgctgaccatactcgaacgggtcggcctcaacgcgcagcat
ctgcgccgttatccgcacgagttctccggcggccagtgccagcgggtaggcattgcacgc
gcgctgatcggcgagccgcaactggtgatctgcgacgagccggtgtccgcgctcgacgtg
tcgatccaggcgcagatcgtcaacctgttgcgcgatctgcaacgcgaattgtcgctctcg
ttgttgttcgtcgcgcacgatctggccgtggtgaaagcgatcagccaccgcgtgctggtg
atgtatctgggacgtgtgatggagttcggcgacaagcgcgaggtgtacggcacgccgcgc
catccgtacacgcgggcgttgctctcggccgtgccggtgcccgatccggtggtggaacgg
gcgcgccgtcatctgctgttgcgcggcgagattgcctcgccgctcaacccgccctccggt
tgcgcgtttcgcacgcgctgcccggatgcgatcgaagcctgcggggaggaaattccgcaa
cctgtcacgcacggtgccaatgcgacacgcgtcgcatgcattcgcgtggtggatgcccca
caggaagccttttcggcccaccgctaa
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