Paraburkholderia dioscoreae: PDMSB3_2682.1
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Entry
PDMSB3_2682.1 CDS
T08115
Symbol
irlS
Name
(GenBank) Sensor protein IrlS
KO
K07644
two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:
2.7.13.3
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PDMSB3_2682.1 (irlS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pdio01001
]
PDMSB3_2682.1 (irlS)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pdio02022
]
PDMSB3_2682.1 (irlS)
01504 Antimicrobial resistance genes [BR:
pdio01504
]
PDMSB3_2682.1 (irlS)
Enzymes [BR:
pdio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
PDMSB3_2682.1 (irlS)
Protein kinases [BR:
pdio01001
]
Histidine kinases
OmpR family
PDMSB3_2682.1 (irlS)
Two-component system [BR:
pdio02022
]
OmpR family
CusS-CusR (copper tolerance)
PDMSB3_2682.1 (irlS)
Antimicrobial resistance genes [BR:
pdio01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
PDMSB3_2682.1 (irlS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
CusS
HATPase_c_2
HATPase_c_3
HATPase_c_5
DehI
Spore_III_AB
ZW10_C2
Motif
Other DBs
NCBI-ProteinID:
VVD33966
UniProt:
A0A5Q4Z3P3
LinkDB
All DBs
Position
II:complement(2777147..2778589)
Genome browser
AA seq
480 aa
AA seq
DB search
MKGAVPRTLQARLTVLIILSTSAILALSGLALHEALRSRLESTSADLMSGTLAALQTHLA
GSRNTEEIVRDVQTWIDLLHGHQNMALAVYDAAGQRLLSTPGFQSYGPILAGRMSRVPAS
LTRVGSNLRYLVAQVPLDEATGRSVRAAVQYDGTNDRALLRAQAYTAVIIEVFGVLLAAA
FAYGIATLGLLPLRRLAAQAEAMSTSRLAQPLPELDATGELKELEHAFNGMLARLDESFT
RLSQFSSNLAHDMRTPLTNLLAAAQVALSQPRTAEDYRDVIESSVDEYQRLSRMIEDMLF
LARSEQADAALSLRSLDAVAEAERVAGYYEPMAEDAQVRIEVTGHGTVQADLLLFQRALS
NLLSNALVQAPKGSTITIDCKEEPNSTTLTVSDSGPGIEAHHLKRIFERFYRVDPSRQAS
ASGTGLGLAIVKSIMNIHAGHCGCESRPHVCTRFWLRFPRRDCSANGVSTPMTRGAVRKD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcgcggtcccacgaacgctgcaggcgaggctgaccgtcctgatcattctgtcg
acgtcggctatcctcgcgctgagcggcctcgcgctgcacgaggcgctgcgaagccgcctc
gagtccacctcggccgatctcatgtccggtacgctggccgcgctgcagacgcatctggcc
gggagccggaacaccgaagagattgtccgcgacgtgcagacgtggatcgacctgctgcat
ggacaccagaatatggcgctcgccgtctacgatgcggcgggtcaacgcctgttgagtaca
cccgggttccagtcctacgggccgattctcgccggccgcatgagccgggtgccggcgagt
ctcacgcgcgtcggctcgaatcttcgatacctcgtcgcccaggtgccgctcgacgaagca
accgggcgctcggtgcgggccgccgttcaatacgatggaaccaacgaccgggctctgctg
cgggcgcaagcctataccgcagtgatcatcgaagtgttcggcgtgcttctcgccgccgcg
tttgcgtatggcatcgccacgctgggcttgctcccgctgcgccggctggcggcccaggcg
gaggcgatgtcgaccagccgccttgcgcagccgttgcccgaactcgatgcgacaggtgaa
ctgaaggaactggagcatgcctttaacggcatgctggcgcggctcgatgaatcatttacc
cggctgagccagttctcctccaatcttgcacacgacatgcgcacgccgctgaccaatctg
ctcgccgccgcgcaggttgcgctgtcacagccgcgaacggcggaggactaccgcgacgtg
atcgaatcgagcgtggacgaatatcaacgcctctcgcgaatgatcgaggacatgctgttc
ctggcgcgctcggagcaggccgacgcggccttgtccttgcgttcgctcgacgcggtcgcg
gaggccgaacgcgttgccggctattacgagccgatggccgaagacgcgcaggtcaggatc
gaggtgacgggacatggtacggtgcaggccgatctgcttctctttcagcgcgcgctgagc
aatctgctttcgaacgcgctcgtgcaggcgccaaagggcagcaccattactatcgactgc
aaggaagaaccgaattcaaccacgctgaccgtatcggattcggggcccggcatcgaggct
caccatctcaagcgcatattcgagcggttttatcgtgtcgatccctcgcggcaggcctcg
gcgtcgggtacgggacttggcctcgccatcgtgaagtcgatcatgaacattcacgcgggg
cattgcggatgcgaaagcagacctcatgtctgcacccgcttctggctgcgttttccccgg
cgcgattgttcggctaacggcgtaagcacgcccatgactcgcggcgccgtacgtaaggat
tga
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