Paraburkholderia dioscoreae: PDMSB3_2754.1
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Entry
PDMSB3_2754.1 CDS
T08115
Name
(GenBank) Outer membrane protein (porin)
KO
K03285
general bacterial porin, GBP family
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
PDMSB3_2754.1
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
VVD34038
UniProt:
A0A5Q4ZP85
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All DBs
Position
II:2858038..2859189
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AA seq
383 aa
AA seq
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MKKTLIAAGLLGAVAITAHAQSSVTLYGTLDAGLVYSNNQGGHSNWQQGSGVASDTYFGL
RGNEDLGGGLHAIFTLESGFNLNNGKYSESNTMFNRQAFVGLQSDKYGALTLGRQYDSVV
DYLAPLSAAGAGYGNNLAAHPLDNDNLDNSFSIKNAVKYTSANYAGLKFGGLYGFSNSAG
DFSNNRAWSVGASYENGPLNVAAAYLQLNKSGSSNLSGAVSQGDGTAAVAADLQRTFGAG
INYTYGPATVGFVYTHTQLDGISGVDVGGTTLPGVAGTNLHLDNYEVNGRYALTPALSLA
ASYTFTDGKMSGSNGSGDPKWHTVSLQGDYSLSKRTDVYVEGVYQHASGELGNFGSNVAA
INTLAPSSTGNQIAAAVGLRHRF
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccctcatcgcagcaggcctcctgggcgcggttgccatcaccgcccacgcg
cagagcagcgtgacgttgtacggtacgctggacgccggcctcgtgtactcgaacaaccag
ggcggccacagcaactggcagcaaggcagcggcgtagcctcggacacgtacttcggtctg
cgcggcaatgaagatctgggcggcggtctgcacgccatcttcacgttggaaagcggcttc
aacctgaacaacggcaagtactcggaaagcaacacgatgttcaatcgtcaggctttcgtc
ggtctgcagagcgacaagtacggcgcgctgacgctcggccgtcaatacgactccgtggtc
gactacctggcaccgctgtccgcagcaggcgcgggttacggcaacaacctcgcggctcac
ccgctcgataacgacaatctggacaattcgttctcgatcaagaacgcagtgaagtacacc
agcgccaattacgcgggcctcaagttcggcggcctgtacggcttcagcaactcggccggc
gacttctcgaacaatcgcgcatggagcgtcggtgcttcatatgagaacggtccgttgaac
gttgccgcggcttacctgcaactgaacaagtcgggcagctcgaacctgagcggcgcggta
tcgcaaggcgacgggaccgcagcagtcgcagccgatctgcaacgcacattcggcgcgggc
atcaactatacgtacggcccggcaacggtcggcttcgtctacacgcacacgcaactggac
ggcatcagcggcgtggacgtcggcggcacgaccttgcctggcgttgcaggcaccaacctg
catctcgacaactacgaagtgaacggccgctatgcactgacgccagcactgagcctcgcg
gcatcgtacaccttcacggacggcaagatgtcaggttccaacggttcgggcgatccgaag
tggcatacggtctcgctgcaaggcgactactcgctgagcaagcgtaccgacgtgtacgtg
gaaggcgtgtaccagcatgcatcgggcgaactcggcaacttcggctcgaacgtcgcggcg
atcaacacgctggcgccttcgtcgaccggcaatcagatcgcggcggcagtcggcctgcgt
caccgcttctaa
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