KEGG   Paraburkholderia dioscoreae: PDMSB3_2807
Entry
PDMSB3_2807       CDS       T08115                                 
Symbol
yoaA
Name
(GenBank) putative ATP-dependent DNA helicase YoaA
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
pdio  Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:pdio00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdio03400]
    PDMSB3_2807 (yoaA)
Enzymes [BR:pdio01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     PDMSB3_2807 (yoaA)
DNA repair and recombination proteins [BR:pdio03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PDMSB3_2807 (yoaA)
SSDB
Motif
Pfam: Helicase_C_2 DEAD DEAD_2 T4SS-DNA_transf Glyco_tran_10_N Helicase_C
Other DBs
NCBI-ProteinID: VVD29263
UniProt: A0A5Q4ZEF0
LinkDB
Position
I:complement(2867463..2869736)
AA seq 757 aa
MQETLALNSPLETSSRATPGDDAASVVTPAPRPAASALSASLNPRRAAELDEIFADNGLL
ARQIDGYRSRASQIEMSRAVAAAMEASGRAMPEPAMFEAQKRPARRLQAPGADAAAEAAE
GAESGGLDGSENTLIVEAGTGTGKTYAYLVPAMLWGGKVIVSTGTKHLQDQLFQRDIPTV
RDALAVPVSVAMLKGRANYLCHYYLQRTADNGRLPSRQETSYLQDIVRFAKITRTGDKAE
LASVPETAAVWSMVTSTRENCLGQECPHYKDCFVMQARREAQQADIVVVNHHLFFADIML
RDTGMAELLPTANTIVFDEAHQLPETATLFFGETLSTTQFLELARDSVAEGLGHARETVD
WVTLGSTLERAARDVRLAFKEDSVRLSIGQLPDDHPLFPALETLETELDALTSALAGQAE
RAESIGACLRRARELRGVLAGWTTPPTEAEREDADAASADGKAERADPNEKVRWIEVFSH
TVQLHETPLSVAPIFAKQRAGVPRAWIFTSATLSVRGDFTHYAAQMGLNAKRSMTLPSPF
DYSTQGLLYVPRNLPQPSSPMFTDAVFDAALPAIEASGGGVFMLCTTLRAVDRISAKLRD
TIEARGWSYPLLVQGDASRTELLDRFRSYGNAILVGSQSFWEGVDVRGDALSLVVIDKLP
FAPPDDPVLSARLDALTKKGLSPFAVHQLPQAVITLKQGAGRLIRAETDRGVLMICDTRL
VDKPYGRRIWQSLPPFKRTREIEVVREFFEENETPAQ
NT seq 2274 nt   +upstreamnt  +downstreamnt
ttgcaggaaacgcttgccttgaattcaccgcttgaaacttcatcccgtgccacgccgggc
gacgacgcagccagtgtcgttacaccggcgccgcgtcctgccgcgtccgcactgagcgcg
tcgctgaacccgcgccgcgccgccgagctggacgagatcttcgccgacaacggcttgctg
gcgcggcagatcgacggctaccgctcgcgggcgtcgcagatagaaatgtcgcgcgcggtg
gccgcggcaatggaagcgtcgggccgcgcgatgcccgagcccgcgatgttcgaggcgcag
aagcggccggcacgccgtctgcaggcgccgggtgcggatgccgccgccgaggccgctgag
ggcgccgaatcgggcgggctcgacggcagcgaaaacacgctgatcgtcgaagccggtacg
ggcacgggcaagacttacgcgtatctcgtgccggccatgctatggggcggcaaggtgatc
gtctccaccggcacgaagcatctgcaggatcagctttttcagcgcgatattccgactgtg
cgcgacgcgctcgcggtgccggtttcggtcgcgatgctcaaggggcgcgcgaattacctg
tgccactactatctgcagcgcacagcggataacggccgtctgccatcgcgccaggaaacc
tcctatctgcaggatatcgtgcgctttgccaagatcacgcgcaccggcgacaaggccgaa
ctggccagcgtgcccgaaacggcggcggtgtggtcgatggtcacgtcgacacgcgaaaac
tgtcttggccaggagtgcccgcattacaaggactgcttcgtaatgcaggcgcgccgcgag
gcgcagcaggcggatatcgtggtggtgaatcaccatctgtttttcgccgacatcatgttg
cgcgatacgggcatggctgaactgctgcccaccgccaacaccatcgtcttcgacgaagcg
caccagttgcccgaaaccgcaacgctgtttttcggcgagacgctctcgaccacgcagttt
ctggagctggctcgcgattcggtggccgaggggctgggtcatgcgcgcgagacggtcgat
tgggtcacgctcggctcgacgctcgagcgcgcggcgcgcgatgtgcggcttgccttcaag
gaagactcggtgcgcctgtcgatcggccaactgccggacgaccatccattgttccccgca
ctggaaacgctggagaccgagctcgatgccctcacgtccgcgctggcgggccaggccgag
cgagccgaatcgatcggcgcttgtctgcgccgcgcacgcgaactgcgaggcgtgcttgcc
ggttggaccacgccgcccacggaggccgagcgcgaggacgctgacgctgcctcagccgac
ggcaaagccgagcgcgccgacccgaacgaaaaggtgcgttggatcgaagtcttctcgcat
accgtgcagttgcacgaaacgccgttgtcggtcgcgccgatcttcgcgaagcagcgcgcc
ggcgtgccgcgcgcgtggattttcacgtcggccacgctctcggtgcgcggcgatttcact
cactacgccgcgcagatgggcctgaacgcgaaacgctcgatgacgttgcccagtcccttc
gattattcgacgcaggggctgctatacgtgccgcgcaatttgccgcagccgtcttcgccg
atgttcaccgacgccgtgttcgacgccgcattgccggcgatcgaggcgtcgggcggcggc
gttttcatgttgtgcacgacgctgcgcgcggtggaccgcatttcggccaagctgcgcgac
acgatcgaagcacgcggctggagctatccgctgctcgtgcagggcgacgcgagccgcacc
gagctgctggatcgctttcgctcatatggcaacgcgattctggtgggcagccagagtttc
tgggaaggcgtggacgtgcgcggcgacgcattgtcgctggtagtgatcgacaagctgccg
tttgcgccgcccgacgatccggttctgtcggcgcgtctcgacgcgctgaccaaaaagggt
ttgagcccgttcgccgtgcatcagttgccgcaggccgtgatcacactgaagcagggagca
gggcgtctgattcgcgcggagaccgatcgcggcgtgctgatgatctgcgatacgcgactc
gtcgacaaaccgtatgggcgccgtatatggcagagcctgccgccatttaaacgcacgcga
gagatcgaggtggttcgcgagtttttcgaagagaatgaaacaccggcgcaatag

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