Paraburkholderia dioscoreae: PDMSB3_2824
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Entry
PDMSB3_2824 CDS
T08115
Symbol
hisS
Name
(GenBank) histidyl tRNA synthetase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PDMSB3_2824 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdio01007
]
PDMSB3_2824 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdio03016
]
PDMSB3_2824 (hisS)
Enzymes [BR:
pdio01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
PDMSB3_2824 (hisS)
Amino acid related enzymes [BR:
pdio01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PDMSB3_2824 (hisS)
Transfer RNA biogenesis [BR:
pdio03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PDMSB3_2824 (hisS)
Prokaryotic type
PDMSB3_2824 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
tRNA-synt_2d
Gp58
Motif
Other DBs
NCBI-ProteinID:
VVD29280
UniProt:
A0A5Q4Z296
LinkDB
All DBs
Position
I:complement(2887669..2889009)
Genome browser
AA seq
446 aa
AA seq
DB search
MTEQKKKLEKLSGVKGMNDILPQEAGLWEFFETTVKSMLRSYGYQNIRTPIIEHTQLFKR
GIGEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFR
HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLMGIKLEINSLGLAHER
AAHRVELIAHLEKHMDVLDEEAKRRLYTNPLRVLDTKNPAMQEVAQNAPKLIDFLGEESR
AHFDGLQRILKANNIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ
LGGKPTAACGWAMGIERILELLKEEQLVPEDEGCDVYVVHQGDAAREQAFIIAERLRDTG
LDVILHCSADGQTASFKSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRDTNANGGKNE
QHNVPAEDLTEFLINAMVATAEDGDD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacagaagaaaaagctcgaaaagctgtccggcgtgaagggcatgaacgacatc
cttccgcaggaagccgggttgtgggaatttttcgaaaccaccgtcaagtcgatgctgcgt
tcgtacggataccagaatattcgtacgccgatcatcgagcatacgcagttgttcaagcgc
ggtatcggtgaagtgaccgacatcgtcgagaaagagatgtatagctttaccgacgcgctc
aatggtgaaaatctgaccatgcgcccggaaaatacggcagcggtggtgcgcgcggcgatc
gaacacaacatgctgtacgacggtccgaagcgcctgtggtacatcggcccgatgttccgt
cacgagcgtccgcagcgcggccgttatcgccagttccatcaggtcggcgtggaagcgctg
ggctttgccggtccggacgccgacgctgaaatcatcatgatgtgccagcgcctgtgggac
gacctcggcctgatgggcatcaagctcgaaatcaactcgctgggtctcgcgcacgaacgc
gcggcgcatcgtgtcgaactgatcgcgcacctcgaaaagcacatggacgtactcgacgaa
gaagcgaagcgtcgtctctacacgaacccgctgcgcgtgctcgatacgaagaatccggcc
atgcaggaagtcgcgcagaacgcgccgaagctgatcgattttctcggcgaagaatcgcgc
gcgcacttcgacggtttgcagcgcattctgaaggcgaacaatattccgttcacgatcaat
ccgcgtctcgtgcgcggtctcgattattacaatctgaccgtgttcgaatgggtgacggac
aagctcggcgcgcaaggcaccgtcgcggccggcggccgttacgatccgctgatcgaacag
ctcggcggcaagcccacggcagcatgcggctgggcaatgggcatcgagcggattctcgaa
ttgctaaaagaagagcaactcgtgccggaagacgaaggttgcgacgtgtacgtggtccac
cagggcgacgcggcgcgcgaacaggccttcatcatcgccgagcgtttgcgcgacacgggc
ctcgacgtcatcctgcattgcagtgcagacggtcagacggccagcttcaaatcgcagatg
aagcgtgcggatgcaagcggcgcggccttcgcggtggtgctcggtgaagacgagatcgcc
aacggcacggtcggcgtgaagccgctgcgcgatacgaatgctaacggcggtaaaaacgag
caacacaacgtgcccgccgaagacttgaccgaatttctaatcaatgcgatggttgcaacc
gccgaagacggcgacgactga
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