Paraburkholderia dioscoreae: PDMSB3_2829.1
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Entry
PDMSB3_2829.1 CDS
T08115
Name
(GenBank) Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
KO
K10439
ribose transport system substrate-binding protein
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio02010
ABC transporters
pdio02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PDMSB3_2829.1
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PDMSB3_2829.1
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdio02000
]
PDMSB3_2829.1
Transporters [BR:
pdio02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
PDMSB3_2829.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Lactonase
Motif
Other DBs
NCBI-ProteinID:
VVD34113
UniProt:
A0A5Q4ZN48
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All DBs
Position
II:complement(2935799..2936764)
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AA seq
321 aa
AA seq
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MIRHFQPARRRAIAAGAAFLAVSILPMPAAFAQAAHKPKVALVMKSLANEFFLTMETGAK
DYQKQNPAKFDLVTNGIKDETDTANQIRIVEQMIVSKVDALVIAPADSKALVPVLKKAVD
AGIIVVNIDNKLDDEVLKSKALNIPFVGPDNAKGAQKVGDYLAKHLKSGDNVGIIEGVTT
TTNAQQRTAGFRQAMQSGGMKVVALQSGEWEIDKGNAVASQILNANPDVKALLCGNDNMA
IGAVSAVRAAGKQGKVQVVGYDDINAIKPMLADGRVLATANQYAAKQAVFGIDTALKALS
EHKKQSELSGVVETPVDLVTK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgattcgccatttccaaccggcgcggcgtcgcgccatcgcagccggcgcggccttcctc
gccgtgtcgattttgccgatgcccgcggcattcgcccaggctgcccataaaccgaaagtc
gcgcttgtcatgaagtcgctggcgaacgaatttttcctgaccatggaaacgggcgccaag
gattatcagaagcagaatccggcgaaattcgacctggtgacgaacggcatcaaggacgag
acggacaccgcgaaccagatccgcattgtcgagcagatgatcgtctcgaaggtcgatgct
ctggtgatcgcgccggccgactccaaggcactggtgccggttctgaagaaagcggtcgat
gccggcatcatcgtggtcaatatcgacaacaagctggacgacgaggttctcaagtcgaaa
gcgctgaatatcccgttcgtcgggccggataacgcgaagggcgctcagaaggtcggcgat
tacctggccaaacacctgaagtcgggcgacaacgtcggcattatcgaaggtgtcacgacc
acgaccaacgcgcagcaacgcaccgccggcttcaggcaggccatgcagtcgggcggcatg
aaggtcgtcgcgctgcaatcgggcgagtgggaaatcgacaagggcaatgccgtggccagc
cagatcctcaacgcgaacccggacgtcaaggccttgctgtgcggcaacgacaacatggcg
atcggcgccgtatcggcggtacgcgcggcgggcaagcagggcaaggtgcaggtggtgggc
tacgacgacatcaacgcgatcaagcccatgctcgccgacggccgcgtgctcgccaccgcg
aatcaatatgccgcgaagcaggcggtgttcggcatcgacacggctttgaaggcgctctcc
gaacacaagaagcagtctgaattgtccggcgtcgttgaaacaccggtcgatctggtcacc
aagtga
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