Paraburkholderia dioscoreae: PDMSB3_2857
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Entry
PDMSB3_2857 CDS
T08115
Symbol
lysS
Name
(GenBank) lysine tRNA synthetase, constitutive
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PDMSB3_2857 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdio01007
]
PDMSB3_2857 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdio03016
]
PDMSB3_2857 (lysS)
Enzymes [BR:
pdio01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PDMSB3_2857 (lysS)
Amino acid related enzymes [BR:
pdio01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PDMSB3_2857 (lysS)
Transfer RNA biogenesis [BR:
pdio03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PDMSB3_2857 (lysS)
Prokaryotic type
Other AARSs
PDMSB3_2857 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
VVD29313
UniProt:
A0A5Q4ZEI3
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All DBs
Position
I:2923110..2924693
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AA seq
527 aa
AA seq
DB search
MRATPVRATEYQIIMTEPTQPSAAQPNAVPEVDDNKIIAERREKLRELREHGVAYPNDFR
PTHHAEDLQAQYEHSDKEALEANPLEVAIAGRMMLKRVMGKASFATVRDGSGQIQFFITP
ADVGQETYDAFKKWDMGDIVAARGVLFRTNKGELSVRCTELRLLSKSLRPLPDKFHGLSD
QEMKYRQRYVDLIVTPETRKTFVARTRAISSIRKFMADADFMEVETPMLHPIPGGAAAKP
FTTHHNALDMQMFLRIAPELYLKRLVVGGFERVFEINRNFRNEGVSVRHNPEFTMIEFYA
AYTDYKWLMDFTEQLIRQAAIDALGTATITYQGRELDLAKPFHRLTITQAIQKYAPQYTN
EQLADSAFLRTELKKFGVDASQPQFLNAGVGALQLALFEETAESQLWEPTYIIDYPIEVS
PLARASDKVDGITERFELFITGREIANGFSELNDPEDQAARFRKQVDQKDAGDEEAMFYD
ADYIRALEYGMPPAGGCGIGIDRLVMLLTDSPSIRDVILFPHLRRED
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcgagccactcccgtgcgggccaccgaataccaaatcatcatgaccgaaccgacccag
cctagtgcggcccagccgaacgccgtgcccgaggtggacgacaacaagatcattgccgag
cgccgcgaaaagctgcgcgaactgcgtgagcacggcgttgcctatccgaacgatttccgc
cccacgcatcacgccgaagatctgcaagcgcaatacgagcactccgacaaggaagcgctc
gaagcgaatccgctcgaagtcgcgattgccggccgcatgatgctcaagcgcgtcatgggc
aaggcgagctttgcgaccgtgcgcgacggctcgggtcagatccagttcttcatcacgccg
gccgacgtcggtcaggaaacgtacgacgccttcaagaagtgggacatgggcgacatcgtc
gcggcgcgcggcgtgctgttccgcaccaacaagggcgagctctcggtgcgctgcaccgaa
ctgcgcctgctgtcgaagtcgctgcggccgctgccggacaaattccacggcctgtccgac
caggaaatgaagtatcgccagcgctatgtcgatctgatcgtcacgccggaaacgcgcaag
accttcgtcgcgcgcaccagggcgatttcgtcgatccgcaagttcatggcggacgccgac
ttcatggaagtcgaaacgcccatgctgcacccgatcccgggcggtgcggcggccaagccg
ttcaccacgcaccacaacgcgctcgacatgcagatgttcctgcgcatcgcgccggagctg
tatctgaagcgtctggtggtcggtggctttgagcgcgtgttcgagatcaaccgtaacttc
cgcaatgagggcgtgtccgtgcgccacaatccggaattcacgatgatcgagttctacgcg
gcgtacaccgactacaagtggctgatggatttcaccgaacagttgatccgccaggccgca
atcgacgcgctgggcacggccaccatcacgtatcaaggccgcgaactggatctggccaag
ccgttccatcgcctcacgatcacgcaggcgatccagaagtacgcaccgcaatacacgaac
gagcaactcgcagacagcgctttcctgcgcaccgaactgaagaagttcggcgtggatgca
tcgcagccgcagttcctgaacgcgggcgtcggtgcgctgcaattggcgctgttcgaggaa
accgccgagtcgcaattgtgggagccgacctacatcatcgactatccgatcgaggtgtcg
ccgctcgcgcgcgcgtcggacaaggtcgacggcatcacggagcgtttcgaactgttcatc
accggccgtgaaatcgccaacggcttctcggagctgaacgatccggaagaccaggctgcc
cgcttcaggaagcaggtcgaccagaaagatgccggcgacgaagaagccatgttctacgac
gcggactacattcgcgcgctcgaatacggcatgccgccggccggcggttgcggtatcggc
atcgaccgtttggtcatgttgctgaccgatagtccgagcattcgcgacgtgattctgttc
ccgcatctgcgccgcgaagactga
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