Paraburkholderia dioscoreae: PDMSB3_2865
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Entry
PDMSB3_2865 CDS
T08115
Symbol
iscS
Name
(GenBank) cysteine desulfurase used in synthesis of Fe-S cluster (tRNA 4-thiouridine sulfurtransferase)
KO
K04487
cysteine desulfurase [EC:
2.8.1.7
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00730
Thiamine metabolism
pdio01100
Metabolic pathways
pdio01240
Biosynthesis of cofactors
pdio04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PDMSB3_2865 (iscS)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PDMSB3_2865 (iscS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdio03016
]
PDMSB3_2865 (iscS)
03029 Mitochondrial biogenesis [BR:
pdio03029
]
PDMSB3_2865 (iscS)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pdio02048
]
PDMSB3_2865 (iscS)
Enzymes [BR:
pdio01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
PDMSB3_2865 (iscS)
Transfer RNA biogenesis [BR:
pdio03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
PDMSB3_2865 (iscS)
Prokaryotic type
PDMSB3_2865 (iscS)
Mitochondrial biogenesis [BR:
pdio03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
PDMSB3_2865 (iscS)
Prokaryotic defense system [BR:
pdio02048
]
DNA phosphothiolation system
Sulfur modification proteins
PDMSB3_2865 (iscS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
B12-binding
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
VVD29321
UniProt:
A0A5Q4YTL1
LinkDB
All DBs
Position
I:complement(2930234..2931457)
Genome browser
AA seq
407 aa
AA seq
DB search
MNNDTLHLPIYMDYSATTPIDPRVVDKMIPYLREQFGNPASRSHSYGWDAERAVEEAREN
VAALVNADPREIIWTSGATESDNLALKGAAHFYKSKGKHIVTVKTEHKAVLDTCRELERE
GFEVTYLDVKDDGLLDLEKFKAALRPDTILVSVMSVNNEIGVIQDIEAIGEITREKGIIF
HVDAAQATGKIAIDLQKLKVDLMSFSAHKTYGPKGIGALYVRRKPRIRIEAQMHGGGHER
GMRSGTLATHQIVGMGEAFRIAREEMATENERIRMLRDRLLRGLSEMEEVYVNGDMEKRV
PHNLNISFNFVEGESLIMAVKDVAVSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTV
GRFTTEQDVDYVINLLKTKISKLRDLSPLWEMHKDGIDISTIQWAAH
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgacactctccatctgcccatctacatggactacagcgcgacgacgccgatc
gatccgcgcgtggtggacaagatgattccgtacctgcgtgagcagttcggcaaccccgca
tcgcgcagccactcgtatggctgggacgcggagcgcgcggtcgaagaagcgcgtgagaat
gtcgccgcgctggtcaacgcagacccgcgcgaaatcatctggacctcgggtgcaacggag
tcggacaaccttgcgctcaagggtgccgcgcacttctacaagagcaagggtaagcacatc
gtcacggtgaagaccgagcacaaggccgtgctcgacacctgccgcgaactcgagcgcgaa
ggcttcgaagtcacgtatctggacgtcaaggacgacggcctgctcgacctcgaaaagttc
aaggccgcgctgcgtccggacacgattctggtgtcggtcatgtcggtgaacaacgagatc
ggcgtgatccaggacatcgaggcgatcggcgagatcacccgtgaaaagggcatcattttc
catgtcgacgcggcgcaagccaccggcaagatcgcgatcgacctgcaaaagctgaaggtc
gacctgatgtcgttctcggcgcacaagacctacggtccgaagggcatcggcgcgctgtac
gtgcgccgcaagccgcgtatccgtatcgaagcgcagatgcacggcggcggtcacgagcgc
ggcatgcgttcgggcacgctggccacgcaccagatcgtcggcatgggtgaggcgttccgt
atcgcgcgtgaagaaatggcgacggaaaacgaacgtatccgtatgctgcgcgaccgtctg
ctgcgcggcctgtcggaaatggaagaagtgtatgtgaacggcgacatggaaaagcgtgtg
ccgcacaacctgaacatcagcttcaatttcgtggaaggcgaatcgctgatcatggcggtg
aaggacgtggcggtgtcgtcgggctcggcctgtacgtcggcttcgctggaaccgtcgtac
gtgctgcgggcgttgggccgtaacgacgaactggcgcacagctcgatccgcttcacggtg
ggccgcttcacgaccgagcaggatgtcgattacgtgatcaacctgctgaagaccaagatt
tcgaagctgcgcgacttgtcgccgctgtgggaaatgcacaaggacgggatcgatatttcg
accatccagtgggcagcgcactga
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