Paraburkholderia dioscoreae: PDMSB3_2873
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Entry
PDMSB3_2873 CDS
T08115
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07262
serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdio01002
]
PDMSB3_2873
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdio01011
]
PDMSB3_2873
Peptidases and inhibitors [BR:
pdio01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
PDMSB3_2873
Peptidoglycan biosynthesis and degradation proteins [BR:
pdio01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PDMSB3_2873
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
VVD29329
UniProt:
A0A5Q4ZBA9
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All DBs
Position
I:complement(2937501..2938748)
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AA seq
415 aa
AA seq
DB search
MLQIANFSLFYYTCGNPLAAPYRTPMKTDMFSSLKVIHGAARSTALSVAASMVIAAAFAT
PVSAFAATPAATAKTSKHAKAAKKPAAAPAKVSKASKAASAKTVAANDDAPRAGVKRKRV
TYTSNGRHHSVVRRVAYEPRPPSVGQAFGLHETPDALMLRSSVAYVIDQNSGEPLFDKNS
RAVVPIASITKLMTAMVVLDSKEPMTDQIEVTDEDRDYEKNTGSRLSVGSVLSREDMLHI
ALMASENRAAAALSRYFPGGRPAFLAAMNAKARQLGMTDTHFENPTGLTSQNVSSARDLV
KMVNAAYQYPLIRRFSTDHSYEVYTGKRSLAYNSTNALVRNPTWDIGLQKTGFINEAGEC
LVMQATIHGRPMIMVLLDSSGKYSRFADATRLRTWLDNGGDQPRITSADAGGSGT
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcaaattgctaatttttcgttgttttactacacttgcggaaaccctctcgccgct
ccctaccgaacacccatgaaaaccgacatgttttcgtcgctaaaagtgatccacggcgcg
gcccgcagcaccgctctgtcggtggccgcctccatggtcatcgcagcggcgttcgccacg
cccgtgagcgcttttgccgccacgcccgctgcaactgcaaaaacctccaaacacgcgaaa
gcggccaaaaagccggccgccgcccctgccaaggtgtcgaaggcgtcgaaagctgcgtct
gcaaagaccgtagccgctaacgacgacgcgcctcgcgcgggcgtcaagcgcaagcgcgta
acgtacacgtcgaatggccgtcaccactccgtggtgcgccgtgtggcgtacgagccgcgt
ccgccgagcgtcggccaggctttcggcctgcacgaaacgccggacgcgctcatgctgcgc
tccagcgtcgcctacgtgatcgatcagaactccggcgaaccgcttttcgacaagaattca
cgcgccgtggtgccgatcgcgtcgatcaccaagctgatgaccgcgatggtggtgctcgat
tcgaaagagccgatgaccgaccagatcgaagtcactgacgaagaccgcgattacgaaaag
aacaccggctcgcgtctgtcggtgggctcggtgctctcgcgtgaagacatgctgcatatc
gctctgatggcgtcggaaaatcgcgcggccgcagcgctgtcgcgttatttcccgggcggc
cgtccggcgttcctcgcggccatgaacgcgaaggcaaggcagcttggcatgaccgacacg
cactttgaaaaccccacgggtttgacgagccagaacgtctccagcgcgcgcgacctcgtg
aagatggtcaatgcggcgtatcagtatccgctgatccgcaggttctcgaccgatcacagc
tacgaggtgtacaccggcaagcgctcgctggcgtacaacagcacgaatgcgctagtgcgt
aacccgacgtgggacatcggtctgcaaaagaccggcttcatcaacgaagcgggtgagtgt
ctcgtgatgcaggcgaccattcatggtcgcccgatgatcatggtgctgctcgactcgtcg
ggaaaatactcgcggttcgcggacgcaacgcgtctgcgcacgtggctggataatggtggc
gaccagccgcgcattaccagcgcggacgccggcggttcgggtacctga
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