Paraburkholderia dioscoreae: PDMSB3_2876
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Entry
PDMSB3_2876 CDS
T08115
Name
(GenBank) Dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00010
Glycolysis / Gluconeogenesis
pdio00020
Citrate cycle (TCA cycle)
pdio00260
Glycine, serine and threonine metabolism
pdio00280
Valine, leucine and isoleucine degradation
pdio00310
Lysine degradation
pdio00380
Tryptophan metabolism
pdio00620
Pyruvate metabolism
pdio00630
Glyoxylate and dicarboxylate metabolism
pdio00640
Propanoate metabolism
pdio00670
One carbon pool by folate
pdio00785
Lipoic acid metabolism
pdio01100
Metabolic pathways
pdio01110
Biosynthesis of secondary metabolites
pdio01120
Microbial metabolism in diverse environments
pdio01200
Carbon metabolism
pdio01210
2-Oxocarboxylic acid metabolism
pdio01240
Biosynthesis of cofactors
Module
pdio_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pdio_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pdio_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pdio_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PDMSB3_2876
00020 Citrate cycle (TCA cycle)
PDMSB3_2876
00620 Pyruvate metabolism
PDMSB3_2876
00630 Glyoxylate and dicarboxylate metabolism
PDMSB3_2876
00640 Propanoate metabolism
PDMSB3_2876
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PDMSB3_2876
00280 Valine, leucine and isoleucine degradation
PDMSB3_2876
00310 Lysine degradation
PDMSB3_2876
00380 Tryptophan metabolism
PDMSB3_2876
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PDMSB3_2876
00670 One carbon pool by folate
PDMSB3_2876
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdio04147
]
PDMSB3_2876
Enzymes [BR:
pdio01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PDMSB3_2876
Exosome [BR:
pdio04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PDMSB3_2876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
GIDA
NAD_binding_8
Pyr_redox_3
AlaDh_PNT_C
BSH_YknX
BSH_CusB
FAD_binding_2
Thi4
FAD_binding_3
GCV_H
BSH_Fcp1
3HCDH_N
BSH_YhbJ
BSH_RND
DAO
OMS28_porin
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
VVD29332
UniProt:
A0A5Q4ZER4
LinkDB
All DBs
Position
I:complement(2940340..2942160)
Genome browser
AA seq
606 aa
AA seq
DB search
MSLVEVKVPDIGDFKDVDVIEVNIKPGDVIENEQALMTLESDKASIEVPSDTAGTVKEVR
VKAGDKVSQGTLIALVETSADAAPAKDAPKAPAKEAEKAPAQAEAKPQQAAQAAAPAPAP
AKAAAAAPQAGSYSGSADIECDMLVLGSGPGGYSAAFRSADLGMKTVLVERYATLGGVCL
NVGCIPSKALLHTALVIDEAEALGAHGITFAKPQIDLDKLREFKSGVVKKLTGGLAGMAK
MRKVEVVTGNGAFVDPHHMEVQTEGGKKVVKFKQAIIAAGSEAVKLPFIPEDPRVVDSTG
ALELRQIPQRMLVIGGGIIGLEMATVYATLGAKIDVVEMLDGLMAGADRDLVKVWEKYNS
KRFANVMLKTKTTAAEAKDDGIHVSFEGEKAPAEAQRYDLVLVAVGRTPNGKKIGADKAG
VAVTDRGFIDVDRQMRTNVPHIFAIGDIVGQPMLAHKAVHEGHVAAEAAHGEKAYFDALQ
IPSVAYTDPEVAWAGKTEDQLKAAGIKYGKAVFPWAASGRAIANGRDEGFTKLLFDEETH
RVIGGGIVGLNAGDLISEVCLAIEMGADATDIGKTIHPHPTLGESIGMAAELYEGVCTDL
PPQKKK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcgtcgaagtaaaagtgccggatatcggcgacttcaaagacgtcgatgtcatc
gaagtcaatatcaaaccgggcgacgtcatcgagaacgaacaggcgctgatgacgctcgag
tccgataaggcttccatcgaagtgccgagcgacaccgccggcaccgtcaaggaagtccgc
gtcaaagctggcgacaaagtctcgcaaggcacgctgatcgcgctcgtcgaaacgtcggcg
gatgcggcgcccgcgaaagacgcaccgaaggctccggccaaagaagctgagaaagcgccc
gctcaggcggaggccaaaccgcagcaggcggctcaagcggcggctcccgctccggctccg
gccaaagcggcagcagccgcgccgcaagccggcagctattcgggcagcgcggatatcgag
tgcgacatgctcgtgctcgggtctggccccggcggctattcggcagcgttccgctcggcc
gacctcggcatgaaaacggtgctggtcgagcgttacgcgacgctcggcggcgtctgtctg
aatgtcggctgtattccgtcgaaagcgctgttgcacaccgcgctcgtgatcgatgaagcc
gaagcgctcggcgcacacggcatcacgttcgccaagccgcaaatcgatctggacaagctg
cgtgagttcaagtcgggcgtcgtcaagaaactgactggcggtcttgcgggcatggcgaag
atgcgcaaggtcgaagtcgtgacgggtaacggcgcgttcgtcgatccgcatcacatggaa
gtgcagaccgaaggcggcaagaaagtcgtcaagttcaagcaggcgatcatcgccgccggt
tcggaagcggtgaaactgccgttcattccggaagatccgcgcgtggtcgattcgaccggc
gcgctcgaactgcgtcagattccgcaacgcatgctggtgatcggtggcggcatcatcggt
ctggaaatggccacggtttatgccacgctcggcgcgaagatcgatgtggtcgaaatgctc
gacggcctgatggccggcgcggaccgcgatctggtcaaggtctgggagaagtacaacagc
aagcgtttcgcaaacgtcatgctgaagaccaaaaccaccgcagccgaagcgaaagacgac
ggcattcacgtctcgttcgaaggtgaaaaggccccggccgaagcgcaacgctacgacctt
gtgctggttgcggtgggccgtacgccgaatggcaagaaaatcggcgccgataaggcgggc
gtggcggtgaccgatcgcggcttcatcgacgtcgacaggcagatgcgcactaatgtgccg
cacatcttcgcgatcggcgacatcgtcggtcagccgatgctcgcgcataaagcggtgcac
gaaggccacgttgccgccgaggccgcgcatggtgagaaggcgtacttcgacgcgttgcag
attccgtcggtggcttacaccgatccggaagtggcgtgggcgggcaagaccgaagaccag
ttgaaggcggccggcatcaagtacggcaaagcggtgttcccgtgggcggcttcgggccgg
gcgattgccaacggtcgcgacgaaggcttcacgaaactgctgttcgacgaggaaacgcat
cgtgtgatcggcggcgggattgtcgggttgaacgccggcgacctgatcagcgaagtgtgt
ctcgcgatcgagatgggtgcggacgcaacggatatcggtaagacgattcatccgcatccg
acgctcggcgaatcgatcggcatggccgccgagctgtatgaaggcgtgtgcaccgacttg
ccgccgcagaaaaagaagtag
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