Paraburkholderia dioscoreae: PDMSB3_2910
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Entry
PDMSB3_2910 CDS
T08115
Name
(GenBank) Autotransporter adhesin
Organism
pdio
Paraburkholderia dioscoreae
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Paralog
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
VVD29366
UniProt:
A0A5Q4ZMY3
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Position
I:2981870..2984299
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AA seq
809 aa
AA seq
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MNFNKPLVWYKTTETWLAEPAPARSKTRRAAGREKAIARAVLGLAVLAGGAPAAQAATIY
FAAAPFNPATDANATAVGPGSIAEGIAAQAVGAYSIAHGMQANAAGTHAVALGMDAQALS
ESSIATGFQATAAATFSIATGVQSNAQAFGSIATGVQATARGDRSTATGLQSDAEGDNSI
ATGAQARAIGTSSVAIGYLSSTLGTGAFAGGNWALAAADYSTAIGNQAFANGVGAMALGA
FAQAAGGNATALGANSSASGTGATAFGADASAASAGSIAVGYAAVASNAGSIAMGRNANA
SADGSVALGQGSLADRANSVSVGSAGNERQVTNVAAGTQATDAVNLSQLQAVSANASRYF
KANGLNDGTDDASATGANAVAIGGSGLAAGQASLAVGTGTQANGDFSTAVGGFAVAQADG
STAVGYQASAMATNATALGYQASAMATNATALGYQANAAAANSTALGRQASAVAVGSVAL
GQGSVANRAGTVSVGSAGNERQITNVAAGAADTDAVNLAQLKAVSAQGAATAAKLDGAVM
YDRNADGSVDRSSVTLGGDSSNGGTLIHNLAAGVAGTDAVNVNQLNAAIAGAVNNAVVDA
ANPFFSAQGNRDTEAAVSSGTHAVAMGASAQATGANAIAVGASSLAGGNNATALGAAANA
SADNSVALGQGSIADRANTVSVGAAGQERLITNVAAGVQGTDAVNVNQLQQSTSAALSQA
NSYTDDQIRSARRDSYGGTASAMAMAGLPQAVLPGHGMVAMAGGTYAGQSAFAIGVSQLS
ETGKWVYKLQGTTDSRGQFGASIGAGMHW
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaataaaccattggtctggtataaaacgacggaaacgtggctggcggaaccg
gcgccggcaagatcgaagacaaggcgagcagcgggtcgcgagaaagctatcgcgcgggcg
gtgctggggctggcggtattggcagggggcgcgccggcggcacaggcggccaccatctat
ttcgcggcagccccgttcaatcccgcaacggacgcgaatgccacggccgtcggccccggc
tcgatcgcggagggcatcgcggcacaggcggtgggcgcctattccattgcgcacggcatg
caggcgaacgcggccggcactcatgcggtagcactcggcatggacgcgcaagcgctgagc
gaaagctcgatcgcaacaggttttcaggccacggcggcagccaccttctcgattgcgacg
ggcgtgcaatcgaacgcacaggccttcggctcgattgcgactggcgtgcaagcaaccgcg
cgcggcgacagatcgaccgcgacaggccttcagtccgatgccgagggcgacaattcgatc
gcgaccggcgcgcaagcaagagcgatcggcacgagttctgtcgcgatcggctacctgtcg
agcacgctcggcaccggtgccttcgcgggcggcaattgggccctggcggcggctgactac
agcactgcgatcggcaatcaggccttcgcgaacggcgttggggcaatggcgttgggcgca
ttcgcgcaggctgccggcggcaacgccacggctctcggcgccaattccagtgcctcgggc
acaggcgccaccgcattcggcgccgacgcatccgcggcgtcggcgggcagcatcgccgtc
ggttacgccgccgttgccagcaacgccggctcgattgcaatgggccgtaacgcgaatgca
tccgctgacggttcggttgccttgggccagggttcgttggctgaccgcgccaattccgtc
tcggtcggctccgcgggcaacgaacgtcaggtcacgaacgtcgcagccggcacccaggca
accgacgccgtcaatctgagccagttgcaggctgttagcgcgaacgcttcgcgctatttc
aaggcaaacggcctgaacgacggaacggacgatgcatcggccacgggcgccaacgcagtc
gccatcggcggttcgggactcgccgcaggacaagcgagccttgccgtcggcacgggcacg
caggcgaatggcgacttcagcacggcggtgggcggcttcgccgtcgctcaggctgacggg
tccaccgccgttggctatcaggcaagcgcaatggccaccaatgcaaccgcactcggttat
caggcaagcgcaatggccaccaatgcaaccgcactcggttatcaagccaacgccgccgcc
gcgaactccaccgcgctcggccgtcaggcgagcgcggtggccgtcggctcggtcgcactc
ggccagggctcggtagccaaccgcgcgggaaccgtctccgtgggctccgccggcaacgaa
cgccagattacgaacgtcgcggccggtgccgccgacaccgacgccgtcaacctcgcacag
ttgaaagccgtgagcgcgcaaggcgcggccaccgccgcgaagctcgacggcgcggtgatg
tacgaccggaacgccgacggcagcgttgaccggagcagcgtcacgcttggcggcgacagt
tcgaacggcggcaccctgatccacaacctcgcggccggcgttgccggaaccgatgcggtc
aacgtgaaccagctgaacgcggccatcgccggcgccgtcaacaacgccgtggtcgatgcg
gccaatccgttcttcagcgcgcaaggcaatcgtgataccgaagccgccgtgtcgtccggc
acgcacgccgtcgccatgggcgccagcgcgcaggccactggcgccaacgcaatcgccgtc
ggtgcaagttcgctggcgggaggcaacaacgccaccgcgctcggcgcggcggcgaatgcc
agcgccgacaactcggtcgcgctgggccagggctcgatcgcggatcgggcgaacacggta
tcagtcggcgcggcgggccaggaacgcctgatcaccaatgtcgcggccggcgtgcaaggc
accgacgccgtcaacgtcaaccagttgcaacaaagcaccagcgctgcgctcagccaggca
aacagctataccgatgaccagatccgctccgcccgccgcgactcatacggtggcacggca
tccgcaatggcaatggccggtttgccgcaagcggtcctgcccggtcacgggatggtcgcg
atggccggcggcacctacgccggccagtcggcgttcgccattggcgtatcgcagctctcg
gaaacgggtaagtgggtctacaagctgcaaggcaccacggattcgcgcggccagttcggc
gcgtcgatcggcgccggtatgcactggtaa
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