Paraburkholderia dioscoreae: PDMSB3_2935.1
Help
Entry
PDMSB3_2935.1 CDS
T08115
Name
(GenBank) Phytoene/squalene synthetase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00100
Steroid biosynthesis
pdio00909
Sesquiterpenoid and triterpenoid biosynthesis
pdio01100
Metabolic pathways
pdio01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
PDMSB3_2935.1
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
PDMSB3_2935.1
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pdio01006
]
PDMSB3_2935.1
Enzymes [BR:
pdio01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
PDMSB3_2935.1
Prenyltransferases [BR:
pdio01006
]
Terpene biosynthesis
Squalene/phytoene synthase
PDMSB3_2935.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
VVD34219
UniProt:
A0A5Q4ZP76
LinkDB
All DBs
Position
II:complement(3060582..3061628)
Genome browser
AA seq
348 aa
AA seq
DB search
MPNPTRAFLLGPLLKGVSRSFYLTLRVLPAGMRDPIGLAYLLARAADTIADTSLIAPQRR
LALLLSLREQVNGATDDAALFQRMAAEVAGQQVQSDEKVLLESLGPALDVLSQLSEFDRE
AVREIVSTLTEGMEFDLRTFPDERSGQIAALREYDELDRYTYLVAGCVGEFWTTMTYAHM
PGTLKERPEIMARRGVRFGKALQMTNVLRDCGKDLRIGRCYLPQTMLDRYGLSAQDLLLP
GNSVRARPLMIELLRKTVDHFREALDYTLAIPASAVRLRLASLWPILIGLETLILLVDND
AWLDPQKVSKVRRNKVYQIIASSLLLVPSNGLVRHAVEQRIRQIEARF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatccgacccgggcctttcttctcggcccgctcctgaaaggcgtttcacgctcc
ttctatctcacgctgcgcgtgctgcccgccgggatgcgcgatccaatcggacttgcctac
ctgttggcgcgtgcggccgacacgattgcggacacctcgctgatcgcgccccaacggcgg
cttgccctgctgctatcgctgcgcgaacaggtgaacggcgcaacagacgacgccgcgctg
ttccagcgcatggccgccgaagtggcggggcagcaggtccagtcggatgagaaagtcctg
ctcgaatcgctcggccccgcgctcgacgtgctgtcgcaactgagcgaattcgaccgcgag
gcggtgcgcgagatcgtatcgacgctgaccgaaggcatggagttcgaccttcgcactttc
cccgacgaacgttccggccagatcgcggcgctgcgcgaatacgacgagctcgaccgctac
acgtatctggtggcgggttgcgtgggcgaattctggaccacgatgacttacgcgcacatg
ccgggcacgctgaaggaacggcccgagatcatggcgcggcgcggcgtgcgtttcggtaag
gcgctgcagatgaccaacgtgttgcgtgattgcggcaaggatttgcggatcggccgctgc
taccttccgcagaccatgctcgaccgatatggtctaagcgcgcaagacctgctgttgccg
ggcaactccgtgcgtgcccggccgttgatgatcgagcttctgcgcaagaccgtggatcat
ttccgcgaagctctcgactatacgctggccattcccgcgtctgccgtacggctgcgcctc
gcgagcctgtggccgattctgatcggtctggagacgctgatcctgctggtggacaacgac
gcctggctcgatccgcagaaagtgtccaaggtacggcgcaataaggtgtatcagatcatc
gcttcgtcgctgttgctggtgccttcgaatggactggtgcgtcacgcggtcgaacagaga
atcaggcagatcgaagcgcgtttctga
DBGET
integrated database retrieval system
