Paraburkholderia dioscoreae: PDMSB3_2936.1
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Entry
PDMSB3_2936.1 CDS
T08115
Name
(GenBank) RecA-superfamily ATPase possibly involved in signal transduction
KO
K08482
circadian clock protein KaiC
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
PDMSB3_2936.1
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
PAXNEB
IstB_IS21
nSTAND3
AAA_16
AAA_22
Rad51
AAA_14
NPHP3_N
AAA_24
AAA_5
ABC_tran
RecA
MEDS
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
VVD34220
UniProt:
A0A5Q4ZS55
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Position
II:3061984..3063459
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AA seq
491 aa
AA seq
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MTIHESPTSSRSNVETGVPGFDEILGGGLVRGGVYLLEGMAGAGKTILSSQIGFHRVSQG
EKVLYMTLIAESHDKLLGHLKGLSFFDENAVAQQMLFVSGYHELMQDGLDGFLKLIASSI
YDYRPSLMIIDGFRSAREFSETELSLSKFIHELNALVAAMDCTTLLLAPLSGNEPHPEHT
LVDGLIELNRYSDGMRRAREIEVHKMRARNHLMGKHFFRIAESGLLMFPRLEAQCAVQPG
PVDLKTRLGFGLPHLDALLGGGFARGSTTTLIGPSGVGKTLLCLQFLAAGIARGERCVYL
GFYEGPQRLIGKAEAVSIGLTEAHEDGRLVIQWQPAIELAVDELAATALATVRKIGASRI
VIDGVEGFRDSALRTERFGLFLNALLHQLREACVTTLLTEELPLYADSSHAKSVRVSALT
ENLLLLRYAETEAGLRRMISVVKQRESAHDTSLRELVISSQGLDVVENLGNPASAYPATG
LSATLPPRRNT
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgactatccacgaatctccgacgtcttcccgatccaatgtcgaaacgggcgtccccggt
ttcgacgagatcctgggcggaggtctggtccgcggcggcgtctacctgctggaaggcatg
gcgggcgccggcaagacgattctgtcgagccagattggttttcatcgtgtaagccagggc
gagaaggtgctgtatatgaccttgatcgccgaatcgcacgacaagctgctcgggcatctc
aagggtctgagcttcttcgacgagaacgcggtcgcacagcagatgctgttcgtgtccggc
tatcacgaactgatgcaggacggtctcgacggcttcctcaagctgatcgcgtcgagcatt
tatgactaccggccgagcctgatgattatcgacggctttcgcagcgcgcgcgaattcagc
gaaaccgagttgtcgctgtcgaagttcattcatgagctgaacgcgctggtcgcggctatg
gattgcacgaccttgctgctcgccccgctctccggtaacgaaccgcatccggaacatacg
ctggtcgacggcctgatcgaactgaaccggtacagcgacggcatgcgccgcgcgcgcgaa
atcgaagtccacaagatgcgcgcgcgcaatcacctgatgggcaagcatttcttccgcatt
gccgaaagcggcctgttgatgttcccgcgtctcgaagcgcaatgtgccgtgcagccgggt
ccggtggatctgaaaacgcgcctcgggttcggcctgccgcatctcgacgccctgctcggc
ggcggctttgcgcgaggctccacgactacgctgatcggcccgtcgggcgtcggcaagacg
ctgctctgcctgcaatttctcgccgccggcatcgcgcgtggcgaacgctgtgtgtatctg
ggcttctacgaaggaccgcagcggttgatcggcaaagccgaggctgtgtcgatcgggctt
accgaagctcatgaggacggccggctcgtgatccagtggcagcccgccattgagctcgcc
gtcgacgaactcgcggccaccgcactcgccacggtcaggaagatcggcgcgtcgcgcatc
gtcattgacggcgtagaaggattccgcgattcggcgttgcgcaccgagcgcttcggcctc
tttctgaatgcgctgctgcaccagcttcgcgaagcctgcgtcaccaccttgctgacagaa
gagctgccgctttacgccgattccagccatgcgaaaagcgtgcgggtctcggcgctgacc
gaaaatctcctgctgctgcgctacgccgaaacggaggcgggtctgcggcgcatgatttcc
gtggtcaagcagcgtgaaagcgcccacgacacttccttgcgagagctcgtgatttcgtct
cagggtctcgacgtggtcgaaaacctggggaaccccgccagcgcgtacccggcaacaggc
ctgtcggccacgctgccaccgcgacgaaatacgtag
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