Entry |
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Name |
(GenBank) ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain
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KO |
K11004 | ATP-binding cassette, subfamily B, bacterial HlyB/CyaB |
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Organism |
pdio Paraburkholderia dioscoreae
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:pdio00001]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PDMSB3_2945.1
03070 Bacterial secretion system
PDMSB3_2945.1
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:pdio02000]
PDMSB3_2945.1
02044 Secretion system [BR:pdio02044]
PDMSB3_2945.1
Transporters [BR:pdio02000]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PDMSB3_2945.1
Secretion system [BR:pdio02044]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PDMSB3_2945.1
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
II:complement(3069821..3072877)
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AA seq |
1018 aa
MDAPQTAPSAAEFLTSVEILSPFSRDEIERLAEYAQARFYSFGETVCSAGETADGLYVVR
SGSVRIFTEEHGKETSMGVRKSGEIFADIAMLRAYVHEASVRASAKTELLFIPRAAIEPV
IAGNQAALAFVASYVAINSAGGFVAQLFDLRGKLNKAELEEYVRSVGVKRVAAGKEILKQ
DGREDRRLYVVRQGQVRIVRHEEGRDYTLATLGEGEIFGEKACLMRQEQMASAVATTDTR
LLVIPERTVHFILERNPKLREVLDERIRYGDRELQRQKRLEQRRKLPLMLDLQTKPEFGE
KVIKRFALVEQAEEMDCGAACLAMICRHYSIPMTLGKLRELANVTTQGATLDSLARAGES
LGFTARGVQCTFDSLRGFDLPFIVHWEGYHYVVVYGLSKDYVWVADPAVGFRKMTVEDFE
RGWSGTCLLFAGGPNLLQMSAARSPWIRFVGYLTPYKKILGHLFLATFVIQVLGVIPPLI
IQNILDGVIVHQNVSLLHLLIGGLIIANVFSQLMSSIRAYLANFMVRNMDFAMMSQFFRH
TLSLPFSFFAKRKTGDIFARFQENQTIRAFLTESTVTTALNLLMVFIYFTIMFVYNVKMT
LVLIAFVIPIMALTAIATPKIKGYAREVFTASTESKSFLMEALAGVETIKGMGIERPVRL
RWEKKYAKALEVQYRAHAFNILVGLGSQLLNAATTIAILWVGANLVLAREMTIGQLIAFN
AFMGSVLGPLMGLVGLWSMLNDAGVAMERLGDVLDIEPEQKPQDLPSRVMLPELQGEISL
SGVYFRYGENDSSYVLENISFDIKPGELVAIVGRSGSGKTTLAKLLVGFYTPTEGKMTID
GYDLGVVDKAYYRAQIGYVMQSNLLFSGTIAENIASGDDAPDRRRIEEVAKMADAHAFIS
KMPLGYEQIVGERGIGLSGGQIQRLCIARALYHDPRLLVFDEATSALDSQSESNILGNMH
DILKGRTAVIIAHRLSTIMRADKILVLYEGAIVEQGRHEELIQRGGMYYQLVQKQLSA |
NT seq |
3057 nt +upstreamnt +downstreamnt
atggatgcaccccagaccgcgccctccgcagccgagtttctgacctcggtggagatcctt
tcgccattttcgcgcgacgagatcgagcgtcttgccgaatatgcgcaagcgcgcttctat
tccttcggcgaaacggtctgctccgcgggcgagacggccgacgggctatacgtggttcgc
tcgggttccgtgcggattttcacggaggagcacggcaaggaaaccagcatgggggtgcgc
aaatccggcgagatctttgccgatatcgcgatgctgcgcgcctatgttcacgaagcgtcg
gtgcgggcgtcggcgaaaaccgagttgctgttcattccgcgtgccgcgatcgagccggtg
atcgccggcaatcaggccgcgctggcgttcgtcgccagttatgtggcaatcaactccgcg
ggcggtttcgtcgcgcaactgttcgatctgcgtggcaagctgaacaaggcggaactcgaa
gagtatgtgcgcagcgtcggtgtgaagcgggtcgcagccggcaaggagattctcaagcag
gatggacgcgaggaccggcggttgtatgtggtgcggcagggccaagtgcgtattgtccgg
cacgaggaaggtcgtgactacacgctcgccacgctcggcgaaggcgagatattcggcgag
aaagcttgcctgatgcgccaggagcagatggcctcggctgtcgcgacgaccgatacgcgg
ctactggtgattcctgagcgcacggtccacttcattctcgaacgcaatccgaagttgcgc
gaagtactcgacgagcggattcgttacggcgaccgcgaattgcagcggcaaaagcggctc
gaacagcggcgcaagctgccgctcatgctcgatctgcagaccaaacccgagtttggcgag
aaggtgatcaaacgcttcgcgctggtcgaacaggccgaggaaatggactgcggcgcggca
tgtcttgcgatgatatgccgccactacagcattccgatgacgctcggcaaattgcgcgaa
ctcgccaacgtcaccactcagggcgccacgctcgacagtctcgcgcgtgcgggcgagtcg
cttggcttcacagcgcgcggcgtgcaatgcacgttcgattcgttgcgcggcttcgacctg
ccgttcatcgtgcactgggagggctaccactatgtcgtggtgtatgggctttcaaaagat
tatgtgtgggtcgcggacccggcggtcggcttcaggaagatgaccgtcgaagatttcgag
cgcggctggagcggcacctgtctgctgtttgccggcggcccgaatctgctgcaaatgtcc
gccgcgcgttcgccgtggatccgctttgtcggctacctcacgccgtacaagaagattctc
ggccacctgtttctcgccaccttcgtgattcaggtattgggcgtgattccgccgctgatt
atccagaacattctggacggcgtgatcgtgcatcagaatgtcagcctgctgcatctgctg
attggcggcttgattatcgccaatgtcttttcgcagttgatgtcgtcgattcgcgcctat
ctggccaatttcatggtgcgcaatatggacttcgcgatgatgtcgcagttcttcaggcac
accctgtcgctgccattctcgtttttcgccaagcgcaagaccggcgacattttcgcgcgc
ttccaggagaaccagacgatccgcgctttcctgaccgaatccacagtcaccacggcgctg
aacctgctgatggtgttcatctacttcacgatcatgttcgtctacaacgtgaagatgacg
ctggtgttgattgcgttcgtcattccgatcatggcgctgaccgcgatcgccacgcctaag
atcaaaggctatgcgcgcgaagtgttcaccgcgtcgaccgaatcgaagtcgtttctgatg
gaagcgctcgcaggtgtcgagaccatcaagggcatgggtatcgagcggccggtgcgtttg
cgttgggagaagaagtacgcgaaggcgctcgaagtgcaatatcgcgcgcatgcgttcaac
attctcgtgggactcggcagtcagttgctgaatgccgcgaccacgattgcgattctctgg
gtcggcgcgaatctcgtgctggcgcgcgaaatgacgatcggccagttgatcgcgttcaac
gcgttcatgggcagcgtactgggtccgttgatgggcctggtcggcttgtggagcatgctg
aatgatgccggcgtggcaatggaacgccttggcgatgtactcgatatcgaacccgagcag
aagcctcaggatctgccttcgcgtgtgatgctgccagaactccagggcgaaatcagtctg
agcggcgtttatttccgctacggcgaaaacgactcgtcgtacgtgctcgaaaacatcagc
ttcgatatcaagccgggtgaactggtggcgatagtcgggcgcagcggttcgggcaagacc
acgctcgccaagttgctggtcggcttctacacgccaaccgagggcaagatgacgatagac
ggttacgatctcggcgtggtcgataaagcctattaccgcgcgcagatcggctatgtgatg
cagagcaacctgctgttttccggcacgattgccgagaatatcgcgagcggagacgatgcg
cccgatcggcgccgcatcgaggaagtggcgaagatggccgacgcacacgcgttcatcagc
aagatgccgctcggctatgagcagattgtcggtgagcgcggaatcggtttgtcgggcggg
cagatccagcggttgtgcattgcgcgggcgctgtatcacgatccgcggctgctggtattc
gacgaagcgacttcggcactggactcgcaatcggaaagcaatattctcggcaatatgcac
gacatcctgaaaggccgcacggcggtgatcatcgcgcatagactcagcacgatcatgcgt
gcggacaagattctcgtgctgtacgaaggagcgattgtggaacagggccgtcacgaagag
ctgattcagcgcggcggtatgtattaccagttggtccagaaacagttgagtgcgtga |