KEGG   Paraburkholderia dioscoreae: PDMSB3_2945.1
Entry
PDMSB3_2945.1     CDS       T08115                                 
Name
(GenBank) ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain
  KO
K11004  ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
pdio  Paraburkholderia dioscoreae
Pathway
pdio02010  ABC transporters
pdio03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pdio00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    PDMSB3_2945.1
   03070 Bacterial secretion system
    PDMSB3_2945.1
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pdio02000]
    PDMSB3_2945.1
   02044 Secretion system [BR:pdio02044]
    PDMSB3_2945.1
Transporters [BR:pdio02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    PDMSB3_2945.1
Secretion system [BR:pdio02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   PDMSB3_2945.1
SSDB
Motif
Pfam: ABC_membrane Peptidase_C39 cNMP_binding ABC_tran SMC_N AAA_22 AAA_25 Guanylate_cyc_2 nSTAND3 AAA_29 AAA_23 NB-ARC MobB NACHT AAA_15 DUF87 RsgA_GTPase
Other DBs
NCBI-ProteinID: VVD34229
UniProt: A0A5Q4ZP81
LinkDB
Position
II:complement(3069821..3072877)
AA seq 1018 aa
MDAPQTAPSAAEFLTSVEILSPFSRDEIERLAEYAQARFYSFGETVCSAGETADGLYVVR
SGSVRIFTEEHGKETSMGVRKSGEIFADIAMLRAYVHEASVRASAKTELLFIPRAAIEPV
IAGNQAALAFVASYVAINSAGGFVAQLFDLRGKLNKAELEEYVRSVGVKRVAAGKEILKQ
DGREDRRLYVVRQGQVRIVRHEEGRDYTLATLGEGEIFGEKACLMRQEQMASAVATTDTR
LLVIPERTVHFILERNPKLREVLDERIRYGDRELQRQKRLEQRRKLPLMLDLQTKPEFGE
KVIKRFALVEQAEEMDCGAACLAMICRHYSIPMTLGKLRELANVTTQGATLDSLARAGES
LGFTARGVQCTFDSLRGFDLPFIVHWEGYHYVVVYGLSKDYVWVADPAVGFRKMTVEDFE
RGWSGTCLLFAGGPNLLQMSAARSPWIRFVGYLTPYKKILGHLFLATFVIQVLGVIPPLI
IQNILDGVIVHQNVSLLHLLIGGLIIANVFSQLMSSIRAYLANFMVRNMDFAMMSQFFRH
TLSLPFSFFAKRKTGDIFARFQENQTIRAFLTESTVTTALNLLMVFIYFTIMFVYNVKMT
LVLIAFVIPIMALTAIATPKIKGYAREVFTASTESKSFLMEALAGVETIKGMGIERPVRL
RWEKKYAKALEVQYRAHAFNILVGLGSQLLNAATTIAILWVGANLVLAREMTIGQLIAFN
AFMGSVLGPLMGLVGLWSMLNDAGVAMERLGDVLDIEPEQKPQDLPSRVMLPELQGEISL
SGVYFRYGENDSSYVLENISFDIKPGELVAIVGRSGSGKTTLAKLLVGFYTPTEGKMTID
GYDLGVVDKAYYRAQIGYVMQSNLLFSGTIAENIASGDDAPDRRRIEEVAKMADAHAFIS
KMPLGYEQIVGERGIGLSGGQIQRLCIARALYHDPRLLVFDEATSALDSQSESNILGNMH
DILKGRTAVIIAHRLSTIMRADKILVLYEGAIVEQGRHEELIQRGGMYYQLVQKQLSA
NT seq 3057 nt   +upstreamnt  +downstreamnt
atggatgcaccccagaccgcgccctccgcagccgagtttctgacctcggtggagatcctt
tcgccattttcgcgcgacgagatcgagcgtcttgccgaatatgcgcaagcgcgcttctat
tccttcggcgaaacggtctgctccgcgggcgagacggccgacgggctatacgtggttcgc
tcgggttccgtgcggattttcacggaggagcacggcaaggaaaccagcatgggggtgcgc
aaatccggcgagatctttgccgatatcgcgatgctgcgcgcctatgttcacgaagcgtcg
gtgcgggcgtcggcgaaaaccgagttgctgttcattccgcgtgccgcgatcgagccggtg
atcgccggcaatcaggccgcgctggcgttcgtcgccagttatgtggcaatcaactccgcg
ggcggtttcgtcgcgcaactgttcgatctgcgtggcaagctgaacaaggcggaactcgaa
gagtatgtgcgcagcgtcggtgtgaagcgggtcgcagccggcaaggagattctcaagcag
gatggacgcgaggaccggcggttgtatgtggtgcggcagggccaagtgcgtattgtccgg
cacgaggaaggtcgtgactacacgctcgccacgctcggcgaaggcgagatattcggcgag
aaagcttgcctgatgcgccaggagcagatggcctcggctgtcgcgacgaccgatacgcgg
ctactggtgattcctgagcgcacggtccacttcattctcgaacgcaatccgaagttgcgc
gaagtactcgacgagcggattcgttacggcgaccgcgaattgcagcggcaaaagcggctc
gaacagcggcgcaagctgccgctcatgctcgatctgcagaccaaacccgagtttggcgag
aaggtgatcaaacgcttcgcgctggtcgaacaggccgaggaaatggactgcggcgcggca
tgtcttgcgatgatatgccgccactacagcattccgatgacgctcggcaaattgcgcgaa
ctcgccaacgtcaccactcagggcgccacgctcgacagtctcgcgcgtgcgggcgagtcg
cttggcttcacagcgcgcggcgtgcaatgcacgttcgattcgttgcgcggcttcgacctg
ccgttcatcgtgcactgggagggctaccactatgtcgtggtgtatgggctttcaaaagat
tatgtgtgggtcgcggacccggcggtcggcttcaggaagatgaccgtcgaagatttcgag
cgcggctggagcggcacctgtctgctgtttgccggcggcccgaatctgctgcaaatgtcc
gccgcgcgttcgccgtggatccgctttgtcggctacctcacgccgtacaagaagattctc
ggccacctgtttctcgccaccttcgtgattcaggtattgggcgtgattccgccgctgatt
atccagaacattctggacggcgtgatcgtgcatcagaatgtcagcctgctgcatctgctg
attggcggcttgattatcgccaatgtcttttcgcagttgatgtcgtcgattcgcgcctat
ctggccaatttcatggtgcgcaatatggacttcgcgatgatgtcgcagttcttcaggcac
accctgtcgctgccattctcgtttttcgccaagcgcaagaccggcgacattttcgcgcgc
ttccaggagaaccagacgatccgcgctttcctgaccgaatccacagtcaccacggcgctg
aacctgctgatggtgttcatctacttcacgatcatgttcgtctacaacgtgaagatgacg
ctggtgttgattgcgttcgtcattccgatcatggcgctgaccgcgatcgccacgcctaag
atcaaaggctatgcgcgcgaagtgttcaccgcgtcgaccgaatcgaagtcgtttctgatg
gaagcgctcgcaggtgtcgagaccatcaagggcatgggtatcgagcggccggtgcgtttg
cgttgggagaagaagtacgcgaaggcgctcgaagtgcaatatcgcgcgcatgcgttcaac
attctcgtgggactcggcagtcagttgctgaatgccgcgaccacgattgcgattctctgg
gtcggcgcgaatctcgtgctggcgcgcgaaatgacgatcggccagttgatcgcgttcaac
gcgttcatgggcagcgtactgggtccgttgatgggcctggtcggcttgtggagcatgctg
aatgatgccggcgtggcaatggaacgccttggcgatgtactcgatatcgaacccgagcag
aagcctcaggatctgccttcgcgtgtgatgctgccagaactccagggcgaaatcagtctg
agcggcgtttatttccgctacggcgaaaacgactcgtcgtacgtgctcgaaaacatcagc
ttcgatatcaagccgggtgaactggtggcgatagtcgggcgcagcggttcgggcaagacc
acgctcgccaagttgctggtcggcttctacacgccaaccgagggcaagatgacgatagac
ggttacgatctcggcgtggtcgataaagcctattaccgcgcgcagatcggctatgtgatg
cagagcaacctgctgttttccggcacgattgccgagaatatcgcgagcggagacgatgcg
cccgatcggcgccgcatcgaggaagtggcgaagatggccgacgcacacgcgttcatcagc
aagatgccgctcggctatgagcagattgtcggtgagcgcggaatcggtttgtcgggcggg
cagatccagcggttgtgcattgcgcgggcgctgtatcacgatccgcggctgctggtattc
gacgaagcgacttcggcactggactcgcaatcggaaagcaatattctcggcaatatgcac
gacatcctgaaaggccgcacggcggtgatcatcgcgcatagactcagcacgatcatgcgt
gcggacaagattctcgtgctgtacgaaggagcgattgtggaacagggccgtcacgaagag
ctgattcagcgcggcggtatgtattaccagttggtccagaaacagttgagtgcgtga

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