Paraburkholderia dioscoreae: PDMSB3_2957
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Entry
PDMSB3_2957 CDS
T08115
Name
(GenBank) Outer membrane protein (Porin)
KO
K08720
outer membrane protein OmpU
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PDMSB3_2957
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdio02000
]
PDMSB3_2957
Transporters [BR:
pdio02000
]
Other transporters
Pores ion channels [TC:
1
]
PDMSB3_2957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
VVD29413
UniProt:
A0A5Q4ZEQ5
LinkDB
All DBs
Position
I:complement(3035870..3036985)
Genome browser
AA seq
371 aa
AA seq
DB search
MKNWVGAVVAFGWLASATDLAHAQSSVALYGLIDEGYTYVSNIGGHSSNALASGIAHGDR
WGLRGTEDLGGGLSAIFDLEGGFNLNTGATGNGGAIFGRQAWVGLQSQKWGAVTAGDQYD
IISDYMCDYNVGFYASGYGIHEGDIDRMECDRLPNAVKYTSPRIGGFKGGIMYSFSNVPG
SFHTGSAWEVGGSYIFGPLHLGLAWASLPGKSIDPYGQLGTPVFFGQTVATVTSTKATDL
NTAFVLNKYNIFAVGGSYKFGKVTVMANFTNTELGYHGMTSYMHVFEGGAIYNPTPAWGL
IASAQHDALQGHAWNQVSAGVQYYLSKRTTVYVSGDYIKASAGVNPELGWFVNPSLTNKQ
MDARLGITHKF
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattgggttggtgcagtcgtcgcatttggctggttggcttcagcaaccgatctc
gcccacgcgcagagtagtgtggctttgtatggattgatcgacgaaggctacacgtacgtt
tccaacattggtggccacagctcgaacgctttggctagcgggatcgcgcacggagaccgc
tggggacttaggggaacggaagacctgggcggcggtctttccgcgatcttcgatcttgaa
ggcgggttcaatctcaacacgggggcgaccggaaatggtggcgcgatcttcggccgccag
gcatgggtcggcctgcagagtcagaagtggggcgccgtgaccgcgggtgatcagtacgac
atcatttcggactacatgtgtgattacaacgtcggcttctacgcgagcggatatggtatt
cacgaaggcgatatcgaccggatggaatgcgaccgcctgcccaatgcggtgaagtacaca
tcgcccaggattggcggcttcaagggcggtatcatgtattcgttcagcaacgttcctgga
agcttccatacgggcagtgcgtgggaagtgggtggcagctacatcttcggcccgcttcat
ctggggctggcctgggcctcgctgccgggcaaatcgatcgatccgtatgggcagctcggc
acgccggtatttttcgggcagacggtcgccacggtcaccagtacgaaagcaacggatctg
aacaccgctttcgtgctcaacaagtacaacatcttcgcagttggcggaagttacaagttc
ggcaaggtgacggtgatggccaacttcacaaacacggagttgggctaccacggcatgact
tcgtacatgcatgtattcgagggcggcgcgatctacaaccctacgccggcctgggggctg
attgcgagcgcccagcatgatgcgcttcagggtcatgcgtggaatcaggtgtcggccggg
gtgcagtactatctgtcgaaacgcaccacggtgtacgtgtccggcgactatatcaaggca
tctgccggggtcaacccggaactcggatggttcgtgaacccgtcgctcaccaacaaacag
atggacgcacgcctcggtattactcacaagttctga
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