Paraburkholderia dioscoreae: PDMSB3_3009.1
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Entry
PDMSB3_3009.1 CDS
T08115
Name
(GenBank) Outer membrane protein (Porin)
KO
K03285
general bacterial porin, GBP family
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
PDMSB3_3009.1
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
VVD34293
UniProt:
A0A5Q4ZNF7
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All DBs
Position
II:complement(3131885..3133045)
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AA seq
386 aa
AA seq
DB search
MKKSLLSVALFGAFTMSAHAQSSVTLYGLIDTGLVYTNNQLGHSNWQEVTSSTQNTVFGL
KGSEDLGGGLHAVFKLEQGFLLNNGAQAFSGDGFGSQAWVGLQSDPFGTLTFGRQFDVMN
DLVGPLTAEFNTWGGSMAAHPFENDNLSANSVVINNSVKYASPTYRGVTFETMYSFSNKA
GDFGNNRSYGFGISYAQGPLNLAAGYLQLNNAGDGSGAVTSGDASANFLAQRQRIWSLGG
NYTFGPATVGLVWSHTQIDNASGVFSFGTGSYLGSGDTSAGSLNGSLRLDNYEVNAKYAL
TPAVTVSGAYTYTHGAYNGSSPGWNTAMLQTDYAISKRTDFYLEGVYQNVHGAPADSVLS
HAMINTLSPSATNTQVAVTVGMRHAF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtctttactctcggtcgcgctcttcggcgcatttacgatgtcggcgcatgcg
caaagcagcgtgaccctctacggcctcatcgatactggattggtttacacgaacaatcag
cttgggcacagtaattggcaggaagtgaccagttcgacgcagaacacggtgttcggcctc
aagggctcggaggatctggggggcggcttgcacgcggtcttcaaactcgagcaaggcttc
ctgctgaacaatggcgcccaggcattctccggcgatggtttcggctctcaggcatgggtc
ggcctgcaaagcgatcctttcggtaccttgacgttcggtcgccagttcgacgtgatgaac
gacctggtcggaccgctcacggcggaattcaacacgtggggcggcagcatggccgcgcat
ccgttcgaaaacgacaacctttctgcgaattccgtcgtcatcaacaattcggtcaagtac
gcgagcccgacttaccgcggcgtcacgttcgaaacgatgtattcgttcagcaacaaggcg
ggcgacttcggcaataaccggtcatacgggttcggcatttcgtatgcgcagggtccgctg
aatctcgctgcaggctatctgcaactgaacaacgcgggcgacggcagcggcgcggtgacg
tcgggcgatgcaagcgcgaacttcctcgcgcaacgccagcgtatctggtcgctgggcggc
aactatacattcgggcccgctactgtggggctggtctggagccatactcagatcgacaac
gcgtcgggtgtgttctccttcggcacgggcagctacctcggttcgggcgacacgtctgct
ggatcgctgaatggctcattgcgcctcgacaactacgaagtgaacgccaagtacgcgctc
acgccggcggtgaccgtatcgggcgcatacacgtacacacatggcgcatataacggttcg
tcgccgggatggaacacggccatgctgcagaccgactatgcgatcagcaagcgcacggac
ttctatcttgaaggcgtctatcagaacgtgcacggggcgcctgcggactccgtactctcg
catgccatgatcaacacgttgtcgccgtcagcgaccaacacgcaagtggcggtcaccgtg
ggtatgcgtcacgcgttctag
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