Paraburkholderia dioscoreae: PDMSB3_3016.1
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Entry
PDMSB3_3016.1 CDS
T08115
Name
(GenBank) Diguanylate cyclase (GGDEF) domain-containing protein
Organism
pdio
Paraburkholderia dioscoreae
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
Motif
Other DBs
NCBI-ProteinID:
VVD34300
UniProt:
A0A5Q4ZSA2
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Position
II:complement(3138021..3139952)
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AA seq
643 aa
AA seq
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MAFSEPGSPFFKWVVSSSQSLSADNRQILLANLFTRTSSIVFASVCEISVCATAYYLHPI
PLYAGWGSAVIALLIARLALIWVCCSRSASNQPTPTSAFLFASLFWSVLFGFGALLCNIS
GDQTLFLLGNVCAVGVIGGLAGRNAGTPRLVMLQITFILLPLALGAALSPGSGKLVLLFQ
APFCAAGFFTVALRSNRDTVALLLARESSHRLAHHDSLTGLPNRARLSELLLERTEMGAV
SKDQSFAVLLIDLDGFKAINDSLGHAAGDQILQEAAIRLREVLPSGDLVGRLAGDEFVAL
CDGAGQARDVRILADRIVKTLARPFALREALVHIGASVGVSLYPDHARTGPQLLICADRA
LYAVKRSGKSAFTIFDAAKHASDESLSLLRSDLEGALHSFSGLRMEYQPIVDLSSGAVCG
REALIRWTHPTRGELPPSSFIPTAERTGLILALGQWALLQSCKEAVTWRDKVTVAVNVSP
VQLREESFASAVAGILRKTRLPPQRLNIEVTETVLLNDDVVTRRNVARLRALGIGLALDD
FGTGFSTMSTLVRFSFDQLKIDSSFVKESVHRRESAAVVRGIVALAREIGMPTTAEGIET
QEQLDFVRVCGCTHAQGFLLGRPVQGHEIAQIDEKAAAHSAKE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagcgaaccagggtctccatttttcaagtgggtcgtctcttcctcccagagt
ctgagcgcagacaatcggcagatattgctggccaacctgttcacacgaacctcgtcgatc
gtgtttgcatcggtttgtgaaatcagcgtctgcgcaacggcttattatcttcatcccata
cccctttacgcaggttggggtagcgcagttatcgcgttgctgatcgcccggctcgcgttg
atctgggtgtgctgctcgcgcagcgccagcaaccagccgacacccacctcggcatttctg
ttcgcgagcctgttctggagcgtgctgttcgggttcggcgcgctgctttgcaatatcagc
ggagatcaaacgctatttctgctcggcaacgtgtgtgcagtgggcgttatcggcggattg
gccggacgtaacgcgggcactccccggctcgtcatgctgcagattacttttattctttta
ccgcttgctctcggcgcggcgctctctcccggctccggcaaactggtgctgctgtttcag
gcccctttctgcgccgccggtttctttacggttgcgctgcgcagcaatcgcgacacggtc
gcgttgctcctcgcgcgggaaagcagccatcgtctcgcccatcatgacagcctcacgggc
ttgcctaatcgcgcgcgtctcagtgaacttctgctggagcgcacggagatgggcgcggtt
agtaaagaccaatcattcgctgttttactgatcgatctggacggattcaaggccatcaac
gacagtctcggccacgcggccggcgatcagattcttcaggaagcggctattcgattgcgc
gaagtgttgccgagcggcgacctcgtcgggcgcttggcaggcgacgagttcgtggcgctt
tgcgacggtgcggggcaggcccgcgacgtccggattctggcggatcgcatcgtgaagact
ctggcacgcccgttcgcactgcgcgaggcgctcgtgcatatcggtgcgagcgtgggcgtc
tcgctctatccggaccacgcgagaaccggtccgcagttgctgatttgcgccgatcgcgcg
ctatatgccgtgaaacgcagcggcaagagcgcgttcaccattttcgatgccgcgaagcat
gcgtcggatgaaagcctgagcctgctgcgcagcgatctggaaggcgcgctgcattcgttc
agcggcttgcgcatggagtaccagcccattgtcgatctcagcagcggcgcggtgtgcggc
cgtgaggcgctgatacgctggacccacccgacccgcggcgagttgccgccatcctcattc
attcctactgccgaacgcacgggcctcattctggctttgggacaatgggctttgctgcag
tcgtgcaaggaagcggtgacctggcgcgacaaggtcaccgtcgccgtcaacgtatcgccg
gtgcaattgagggaggagtcgtttgcttcggccgtcgcggggattctgcgcaagaccaga
ctgccgccgcagcgcctgaacatcgaggtcacggaaaccgtgttgttgaatgacgatgtc
gtgacccggcgcaacgtcgcgaggctgcgagcattgggtattggtctcgcgctcgacgat
ttcggcaccggtttttcgaccatgtcgaccctcgtgcgtttttcattcgaccagctcaag
atagacagctcattcgtcaaggagtccgtgcatcggcgggaatccgctgcggtggtacgt
gggatcgtggcgttggcgcgggaaatcggcatgccgactacggcggagggcatcgagacg
caggagcaactggatttcgtgcgcgtatgcggatgcacgcatgctcagggttttctgctt
ggcaggccggtgcaggggcacgagattgcgcagatcgatgaaaaggctgccgcgcattcc
gcgaaggaatga
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