Paraburkholderia dioscoreae: PDMSB3_3045.1
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Entry
PDMSB3_3045.1 CDS
T08115
Name
(GenBank) Outer membrane protein (Porin)
KO
K03285
general bacterial porin, GBP family
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
PDMSB3_3045.1
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GFIT
Motif
Pfam:
Porin_4
Motif
Other DBs
NCBI-ProteinID:
VVD34329
UniProt:
A0A5Q4ZPD8
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Position
II:complement(3167097..3168233)
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AA seq
378 aa
AA seq
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MLLAMTSPLVHAQASLRLTGSMDAGIAYVSDAGNTSGHQSAWQAKNGDVNISRWALTGEE
PITHDLNALFTLTNGFSVMTGTAAQQGRLFGFQSFVGLASKSTGTVTLGRQFDAVVQYVE
PFALGGTAYGGTAFAHPYDNDNLDNYTRTNNSVKYSSPEFHGLTFGGTYGFSNKAGAFDD
SREYSLGASYHYGGMRVGAGYFQFNHASNLATANTEGSEPAGAPFNADRQRTYALGGNYR
YNDALVGLVLSETRLDNATSINNVADTAISLPHDNVRFENAEVNLRYFITPKWHVSANYV
FTYGRFDTPAGVRYPKWHQLGLLNTYFLSQRTDVYAEALYQRANQLQGTGIQGAQISNFS
RASGANQFVAAVGLRHRF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcttctggccatgacgtcgccgctcgttcatgcacaagcttcgctgcggctgaccgga
tcaatggacgccggcattgcatacgttagcgatgcgggcaacacgtcgggacatcagtcg
gcctggcaagcaaaaaacggtgacgtcaacatcagccgctgggcgctgacgggcgaagaa
cccattacccacgacctgaatgcgctctttacgctgaccaacggcttttccgtcatgacg
ggaacagccgcgcagcaggggcgattgttcgggtttcagtcgtttgtggggctcgcttcg
aagagtacgggaacggtcacgctgggccgccagttcgacgcagtggttcaatacgtcgag
cctttcgcactcggcggaacagcatacggcggtacggctttcgcgcatccgtacgacaac
gacaatctggataactacacgcgtacgaacaattcggtcaaatactcgagcccggagttt
cacgggctgacgttcggcggcacgtatggcttttcaaacaaggccggcgcatttgacgac
agccgcgagtacagcctgggcgccagctaccactatggcggcatgcgcgttggtgcgggt
tacttccagttcaaccacgcttcgaacctcgctactgccaatacggaaggctcggaaccg
gcgggagcgcctttcaacgccgatcgacaacggacgtacgcattgggcggaaactaccgg
tacaacgacgcgcttgtcggtctggtgctgagcgaaacacggctcgacaacgcaacgtcg
atcaacaacgtcgccgatacggcgatttcgctgccacacgacaatgtccgcttcgaaaat
gccgaggtcaatttgcgctacttcattacgcccaaatggcatgtctcggccaattacgta
tttacatatggccggttcgacacacctgccggcgtgcgttatccgaaatggcatcagctc
gggttgttgaacacgtatttcctttcacagcgaaccgacgtgtatgccgaggcgttatat
caacgtgcgaaccagttacagggcacgggaattcagggcgcccagatctcgaacttttcg
cgtgcctcgggggcgaatcaattcgtcgcggctgtcggtctgcgccaccggttctag
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