Paraburkholderia dioscoreae: PDMSB3_3056
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Entry
PDMSB3_3056 CDS
T08115
Name
(GenBank) (P)ppGpp synthetase, RelA/SpoT family
KO
K00951
GTP pyrophosphokinase [EC:
2.7.6.5
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00230
Purine metabolism
pdio01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
PDMSB3_3056
Enzymes [BR:
pdio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
PDMSB3_3056
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Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
ACT_4
ACT_AHAS_ss
RelA_AH_RIS
ACT
ThiS
Motif
Other DBs
NCBI-ProteinID:
VVD29512
UniProt:
A0A5Q4ZF38
LinkDB
All DBs
Position
I:complement(3136140..3138383)
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AA seq
747 aa
AA seq
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MNTEIVTSTPKPLPSFDEAMAFVREHAGEVRLSSGEMLADHAAGTASIMRTLNVDPPAVL
AAALFALTPHLQDPERVIADNFGEEVAQLVGDVRKLLRLGTVSLRAAQNAMPEAGRDAQA
ARRAQVEALRKMLLAFAQDIRVVLIRLASRLQSLRYYAAAKITPSPDVARETLDIYAPLA
NRLGIWQLKWELEDLALRFEEPVTYKRIAKLLDEKRVERESYVAQAIERLQKELAAAHIR
AEVSGRPKHIYSIWRKMRGKELDFAELYDVRAFRVIVPDIKDCYTVLGIVHNLWQPVPKE
FDDYISRPKPNGYKSLHTVVIGDDGRAFEVQIRTQEMHQFAEYGVAAHWRYKEAGVRGYG
GQFTANEKYDEKIAWLRQLLAWKDEVSEGEHGEKRAAQPWEQLRQATLDDDHIYVLTPQA
RVIPLPHGATPVDFAYHLHSELGHRCRGARVDGAMVPLNTPLQNGQTVEIVAVKEGGPSR
DWLNPQLGYLQSPRARQKVRAWFNAVEVQEHIASGRAMVEKTLQREGKTSVNLDQLAAKL
GFKTTDDLFSVVGKEEFSLRLVEQALHDAPPPEPVVDAPEQFEKRSSGASVARGASTGVL
VVGVDALLTQLARCCRPAPPDDICGFVTRGKGMSIHRSDCATFLRMAERAPERVLQTAWS
AEVMSGRGQSVYPVDLSIEATDRQGLLRDISEVFAREKMNVIGVKTQTRRNAAFMQFTVE
VSNAAQIQRACTLLGEVTGVVRASRRS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgaaatcgttacgagcacgccgaagcccctgccttctttcgatgaagcaatg
gcgttcgtgcgtgaacatgcgggcgaggtgcggctctcgtcgggcgaaatgctggcggat
catgcggcgggtacggcgtcgatcatgcgcacgctcaacgtcgatccgccggcggtgctg
gcggcggcattgtttgcgctgacgccgcatctgcaggatccggagcgtgtgatcgccgac
aacttcggcgaagaagtcgcgcaactggtcggcgatgtgcgcaagttgctgcgccttggc
accgtgagcttgcgtgccgcgcagaatgccatgcccgaagccgggcgcgacgcccaggcc
gcgcgccgcgcgcaggtcgaggcgctgcgcaagatgctgctcgcattcgcgcaagatatt
cgagtggtgctgatccggctcgcgtcgcgcctgcaatcgctgcgttattacgcggcggcg
aaaatcacgccctcgccggacgtggcccgcgagacgctcgatatctatgcgcctctcgcc
aaccgcctgggcatctggcaactgaagtgggagctcgaagatctcgcgctgcgcttcgaa
gagccggtcacttacaagcgcatcgccaaactgctcgacgagaaacgcgtcgagcgcgag
agctatgtcgcgcaggctatcgagcgcctgcaaaaggaactggccgcggcgcatattcgt
gcagaggtgagcggcaggccgaaacacatctacagcatctggcgcaagatgcgcggcaag
gaactggacttcgccgaactgtacgacgtgcgcgcctttcgggtgatcgtgccggacatc
aaggattgctacaccgtgctcggcattgtgcacaacctgtggcaaccggtgccgaaagag
ttcgacgactatatctcgcggccgaaaccgaacggctataaatcgctgcacacggtcgtg
atcggcgacgacggccgcgcgttcgaagtgcagatccgaacgcaggaaatgcatcagttc
gccgaatacggcgtggcggcacattggcgctacaaggaagcgggcgtgcgcgggtacggc
ggccagttcaccgcgaacgagaagtacgacgagaagatcgcgtggctgcgccaattgctc
gcgtggaaagacgaagtctccgagggcgagcacggcgagaagcgtgcggcgcagccatgg
gagcaactgcgccaggccacgctcgacgacgaccatatctatgtgctgacgccgcaggcg
cgggtgattccgttgccgcacggcgcaacgcccgtcgatttcgcgtaccacctgcatagc
gagctggggcatcgctgccgcggcgcgcgcgtggatggcgcaatggtgccgctcaacaca
ccgctgcagaacggtcagacggtcgagatcgtcgcggtcaaggagggcggcccgtcgcgc
gactggctgaacccgcaactcggctatctgcaaagtccgcgcgcgcggcaaaaagtgcgc
gcgtggttcaacgcggtcgaagtgcaggaacatatcgcgagcggccgcgcgatggtcgaa
aagaccttgcagcgcgagggcaagacgtcggtcaatctggatcagctcgcggccaagctt
ggcttcaagaccaccgacgatctgttctcggtggtgggcaaggaagaattcagtttgcgg
ctcgtcgagcaggcgctgcacgatgcgcctccgcctgagccggtggtcgacgcgcctgag
caattcgaaaagcgcagtagtggcgcgagcgtagcgcgcggtgcgtccaccggcgtgctg
gtggtcggtgtcgacgcgttgctcacgcaactcgcgcgctgttgccggccggcgccgccc
gacgacatctgcggctttgtcacgcgtggtaaaggcatgtcgattcaccgcagcgattgc
gcgacgttcctgcgcatggccgagcgggcgcccgagcgagtgctgcaaacggcgtggtcg
gcggaggtaatgagcggccgcggccagtcggtctatccggtcgatctctcgatcgaagcc
acggaccggcagggtttgctgcgcgatatttccgaagtgttcgcgcgtgaaaagatgaac
gtgatcggcgtgaagacgcagacgcggcgtaacgctgcgttcatgcaatttaccgtcgag
gtatcgaacgccgcgcagattcagcgcgcgtgtacgctgctcggtgaggtgacgggcgtg
gtgcgtgcatcgcgcaggagttga
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