Paraburkholderia dioscoreae: PDMSB3_3056.1
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Entry
PDMSB3_3056.1 CDS
T08115
Name
(GenBank) Outer membrane protein (Porin)
KO
K03285
general bacterial porin, GBP family
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
PDMSB3_3056.1
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GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
VVD34340
UniProt:
A0A5Q4ZSD0
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All DBs
Position
II:complement(3179774..3180928)
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AA seq
384 aa
AA seq
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MRKSFIVAGIVSLFAVTAHAQSSVTLYGSLDAGLVYSNNQGGHSAWQEGSGVVSNTYFGL
RGNEDLGGGLHAIFTLESDFNLNNGQFQDGSTMFNRQAYVGLKSDQFGQVTLGRQYDSVV
DYLAPISAAGAGFGNNLAAHPLDNDNLDNSFSLKNTVKYSSANYAGFQFGGLYGFSNGAG
DFSNNRAWSVGASYANGPFNVAAAYLQMNNSGGTSGGATSVGAGEANIGAALQRTYGVGL
NYTYGPAVVGFVWTHTQLDGIGAVSNGFSGSNFSAGLPGTNLHLDNFEINGRYALTPALG
IAAAYTYTDGKVSGTGTGDPKWHTVSLEADYSLSKRTDVYAGGVYQHASGELGNGVANVA
VVNGVSPSSNGNQVVGTIGMRHRF
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagtcatttattgttgcgggaatcgtgagtttattcgccgtgaccgctcacgct
caaagcagcgtcacgttatacggttctcttgatgccggcctggtttattccaacaaccag
ggtggtcacagcgcgtggcaggaaggtagcggcgtagtgtcgaatacgtacttcggcctg
cgcggtaatgaggatctcggcggcggtctgcatgcgatcttcacgttggaaagcgacttc
aacctgaacaacggccagttccaggacggcagcacgatgttcaatcgccaggcgtatgtc
ggcctgaagagcgaccagttcgggcaagtcacgctcggccgtcagtatgactccgtggtc
gactacctcgcgccgatttcggctgctggcgccggcttcggtaacaacctggccgcccac
ccgctcgataacgataacctcgataactcgttctcgctcaagaacacggttaagtactcg
agcgcgaattacgcaggcttccagttcggcggcctgtatggcttcagtaacggcgcaggg
gatttctcgaataaccgcgcatggagcgttggggcatcgtatgcgaacggcccattcaac
gttgccgccgcctatctgcagatgaacaactcgggcggtacttcgggcggtgcaacgtcg
gtcggggcaggcgaggcgaacatcggcgcagcgctgcaacgcacttatggtgttggcctg
aattacacctacggtccggcggtggttggattcgtctggacgcacacgcaacttgacggc
atcggcgcagtcagcaacggcttcagcggatcgaatttctccgcggggctgccgggcacc
aatctgcacctggacaacttcgaaatcaatggccgctatgcgctgacgccggccttgggc
atcgcggcagcctacacgtacacggacggcaaggtgtccggtacgggaacgggcgatccg
aagtggcacacagtgtcgctcgaggcggactattcgcttagcaagcgcacggacgtgtat
gcgggtggtgtctatcaacacgcatcgggcgaactcggcaacggtgttgcgaacgtcgct
gtcgtcaatggcgtttcgccgtcgtcgaacggcaatcaggtggtcggtactattggcatg
cgccatcgcttctaa
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