Paraburkholderia dioscoreae: PDMSB3_3096
Help
Entry
PDMSB3_3096 CDS
T08115
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PDMSB3_3096 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdio01007
]
PDMSB3_3096 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdio03016
]
PDMSB3_3096 (valS)
Enzymes [BR:
pdio01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
PDMSB3_3096 (valS)
Amino acid related enzymes [BR:
pdio01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PDMSB3_3096 (valS)
Transfer RNA biogenesis [BR:
pdio03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PDMSB3_3096 (valS)
Prokaryotic type
PDMSB3_3096 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
VVD29552
UniProt:
A0A5Q4ZF63
LinkDB
All DBs
Position
I:3180690..3183569
Genome browser
AA seq
959 aa
AA seq
DB search
MSETPSDTTSTLAKSFEPQTIEAHWGPEWEKRAYATPVIQENRKDFSIQLPPPNVTGTLH
MGHAFNQTIMDGLTRYHRMLGENTLWVPGTDHAGIATQIVVERQLDAQGVSRHDLGREKF
VERVWEWKQQSGSTITNQVRRLGASIDWSREYFTMDDKMSAAVRDVFVRLYEQGLIYRGK
RLVNWDPVLLTAVSDLEVVSEEENGSLWHIQYPLTDGSGHLTVATTRPETMLGDTAVMVH
PEDERYAHLIGKTITLPLSGREVPIIADDYVDREFGTGVVKVTPAHDFNDYQVGLRHKLP
QIEILTLDAKINDNAPEKYRGLDRFEARKQVVADLEALGVLESVKPHKLMVPRGDRTGVV
IEPMLTDQWFVAMSKPAPEGTFNPGKSIAETALDVVRSGEIRFVPENWTTTYYQWLENIQ
DWCISRQLWWGHQIPAWYGENGEIFVAKTEEDARAKATAAGYTGALKRDEDVLDTWFSSA
LVPFSSLGWPNETQELKHFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFDTVYVHGL
VRDAEGQKMSKSKGNTLDPIDIVDGIDLDSLVAKRTTGLMNPKQAASIEKKTRKEFPDGI
PAFGTDALRFTMASMATLGRNVNFDLARCEGYRNFCNKLWNATRFVLMNCEGHDCGFGKP
EQCGECGPDGHLNFSSADRWIVSRLQRVEAEIAKGFTDYRFDNVANALYKFVWDEYCDWY
LELAKVQIQTGQPNQQRATRRTLLRVLETVLRLAHPVIPFITEALWQKVAPLAGRYPEGK
AEGEASIMVQPYPVAEPSKIDEDAEQWAADLKAVIDACRNLRGEMNLSPAVKVPLLATGN
AERLRTFAPYAQALARLSEVQIIADEATLDAQADGAPIAIVGNDKLVLKVEIDVAVERER
LSKEIARLSTEIIKCNGKLQNESFVAKAPPAVVEQEQKRLAEFEATVGKLKAQLARLPV
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaccccgagcgacaccacctccacgcttgccaaaagcttcgagccccagacc
atcgaagcccattggggccccgaatgggaaaagcgcgcgtacgcgacgcccgtcatccag
gaaaaccggaaagatttctcgatccaactgccgccgccgaacgtcacgggcaccctccac
atgggccacgcgttcaaccagacgatcatggacggcctcacccgctaccaccgcatgctc
ggcgaaaacaccctgtgggtgccgggcacggaccacgccggtatcgccacgcagatcgtc
gtcgagcggcaactggacgcgcaaggcgtctcgcgccacgacctcggccgtgaaaagttc
gtcgaacgcgtgtgggaatggaagcagcagtccggctcgaccatcacgaaccaggtgcgg
cgtctgggagcctcgatcgactggtcgcgcgaatacttcacgatggacgacaagatgtcg
gccgccgtgcgcgacgtgttcgtccgtctatatgagcaaggcctgatctatcgcggcaag
cgcctcgtgaactgggatcctgtgctgctcaccgcggtctccgacctcgaagtggtcagc
gaggaagaaaacggctcgctgtggcacatccagtacccgctcacggacggttcgggccat
ctgacggtcgccaccacgcgtccggaaaccatgctcggcgataccgccgtgatggtccac
ccggaagacgagcgctacgcgcatctgatcggcaagacgatcacgctgccgctgtcgggt
cgcgaagtaccgatcatcgcggatgattacgtcgaccgcgaattcggcacgggcgtcgtc
aaggtcacgcccgcgcacgatttcaacgactaccaggtcggcctgcgccacaagctgccg
caaatcgaaatcctcacgctcgacgcgaagatcaacgacaacgcgccggagaaataccgc
ggcctcgaccgcttcgaagcgcgcaagcaggtggtggccgacctcgaagcgctcggcgtg
ctggaatcggtcaagccgcacaagctgatggtgccgcgcggcgaccgcacgggcgtcgtg
atcgagccgatgctgacggaccaatggttcgtcgccatgagcaagccggcgccggaaggc
accttcaatccgggcaaatcgatcgcggaaacggcgctcgacgtggtgcgcagcggcgaa
atcaggttcgtgccggaaaactggaccaccacttactatcaatggctcgagaacattcag
gactggtgcatctcgcgccagctctggtggggtcatcagatcccggcgtggtacggcgaa
aacggcgaaattttcgtggcgaaaaccgaagaagacgcacgcgccaaagccacggcagcc
ggctacacgggcgccctcaagcgcgacgaagacgtgctcgacacgtggttctcgtccgct
ctggtgccgttctcgtcgctcggctggccgaatgagacgcaggaactcaagcacttcctg
ccttcttcggtgctggtcaccggcttcgacatcattttcttctgggtcgcgcgcatggtc
atgatgaccacgcacttcaccggcaaggtgccgttcgacacggtgtacgtgcacggtctc
gtgcgcgacgccgaaggccagaagatgtcgaagagcaagggcaatacgctcgacccgatc
gatatcgtcgacggcatcgacctcgactcgctcgtcgccaagcgcactaccggcctgatg
aacccgaagcaggccgcgtcgatcgaaaagaaaacccgtaaggaattccccgacggcatc
ccggcgttcggcaccgacgcactgcgcttcacgatggcctcgatggccacgctcgggcgc
aacgtcaatttcgatctcgcgcgctgcgaaggctaccgcaacttctgcaacaagctgtgg
aatgccacccgtttcgtgctgatgaactgcgaaggccacgattgcggcttcggcaagccg
gaacaatgcggcgaatgcggtcctgacggacacctgaacttctcgtcagcggaccgctgg
atcgtctcgcgtctgcaacgggtggaagcggaaatcgccaagggtttcaccgactatcgt
tttgacaatgtggccaacgccctatacaagttcgtatgggacgaatactgtgactggtat
ctcgaactcgccaaggttcagatccagacgggtcagccgaaccagcagcgcgccacgcgc
cgcacactgctgcgcgtgctcgagacggtgctgcgcctcgcgcatccggtgattccgttc
atcaccgaagcgctgtggcagaaagtagcgccgttggctgggcgttatcccgaaggcaag
gccgagggtgaagcgtccatcatggtgcagccttaccccgttgccgaaccgtcgaagatc
gatgaagacgctgagcaatgggcggccgacctgaaggctgtgatcgatgcgtgccggaat
ctgcgcggcgaaatgaatctgtcgccggcggtcaaggtgccgttgctcgctaccggcaac
gcggagcgtctgcgcacctttgctccgtacgcacaggcattggcacgtttgtccgaagtg
cagatcattgccgacgaggcaacactggatgcgcaagcagatggcgcgccaattgctatc
gtagggaatgacaagctcgtgctgaaggtggaaatcgacgtggcagtcgagcgcgagcgg
ttgtcgaaggagattgcgcggttgagcacggaaatcatcaagtgcaacggcaaattgcag
aatgaaagtttcgttgcaaaggcgccgccggcagtcgttgagcaggagcagaaaagactg
gcagagttcgaagccacggtgggcaagctgaaagcccaattggcccgcttgccggtctga
DBGET
integrated database retrieval system
