Paraburkholderia dioscoreae: PDMSB3_3142
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Entry
PDMSB3_3142 CDS
T08115
Symbol
dinF
Name
(GenBank) DNA damage-inducible protein F
KO
K26937
MATE family, multidrug efflux pump
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdio02000
]
PDMSB3_3142 (dinF)
Transporters [BR:
pdio02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
PDMSB3_3142 (dinF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
VVD29598
UniProt:
A0A5Q4YVY2
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All DBs
Position
I:3231355..3232722
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AA seq
455 aa
AA seq
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MSDAAHDADTSAAAPAVPVRWHRRVLALAFPIVLANLTQPILGAVDTAVAGHLDGASYLG
GVALGGLFFNFVFWGFGFLRMGTTGLVAQAHGANDRAGLRNNVVRALLLAAAIGAVVLAL
QMPLIDYALRVIGGSDAVQRNARLYCHARIWAAPLALGNYVVLGWLLGTQQVRLALLSQV
FINSVNIVAVLLYVYVFDWSVAGIGAATATADALGFVLGAALLWYGRPRGLPALNRAALF
DAAALRRLVVLNRDIFIRTVCLLSSFGWFAHLGARQGDATLAANALLLNFQTFMAYGLDG
FAHAAEALVGAAIGARDRHAFTQAIKVTALWATLGALGFSLVYWGAGSWIVERLTDQAAV
RATAEMYLPWAALSPVVSVWGFLLDGVFIGATRTRELMTSMVVSFALFVAASWALLALYG
NHGLWAAMLLFMALRGLTLGRYVPAVVRGMAGAAA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacgccgcgcacgacgcggacacgtcggcagcggcgcccgccgttcccgtgcgc
tggcaccgccgggtgctggcgctggcttttcccatcgtcctcgccaatctgacgcagccg
attctcggcgcggtcgacacggccgtcgccggtcatctggacggcgcttcgtatctcggc
ggtgtggcgctcggcggcctctttttcaacttcgtgttctggggcttcggcttcctgcgc
atgggcaccacgggtctggtcgcgcaagcgcacggcgcgaacgaccgggccgggttgcgc
aacaacgtcgtacgcgcgctgctgctggcggccgcgatcggcgccgtggtgctggcgctg
caaatgccgctgatcgattacgcgttgcgcgtgatcggcggcagcgacgcggtgcaacgc
aacgcacggctctattgccacgcgcgcatctgggcggccccgctcgcgctcggcaactac
gtcgtgctcggctggctgctcggcacgcagcaggtgcggctcgcgttgctctcgcaggtg
tttatcaacagtgtgaacatcgtggcggtgctgctgtacgtgtacgtgttcgattggagc
gtggccggcatcggcgcggccacggccaccgccgacgcactcggcttcgtgctcggcgcc
gcgctgttatggtacggcaggccgcgcggcctgcccgcgctgaaccgcgccgcgttgttc
gacgcggccgccctcaggcggctggtggtgctcaaccgcgacattttcatacgcacggtg
tgtctgctctcgtcgttcggctggtttgcgcatctgggcgcgcggcaaggcgacgccacg
ctcgccgccaatgcgctgctgctcaattttcagaccttcatggcctacggactcgacggc
ttcgcgcatgccgccgaagcgctggtcggcgcggcgatcggcgcacgcgaccggcatgcg
ttcacccaggcgatcaaggtgactgcgctgtgggccacactcggcgcgctggggttctcg
ctggtgtattggggcgcgggctcgtggatcgtcgaacgtctgacggatcaggccgccgtg
cgcgcgaccgcagagatgtatctgccgtgggccgcgctctcgccggtggtgtccgtgtgg
ggctttctgctcgacggcgtgtttatcggcgcgacccgcacgcgcgaactgatgacgtcg
atggtggtgtcgtttgcgctgttcgtggcggcttcgtgggccttgctggcgctctacggc
aaccacggcttgtgggccgcgatgctgcttttcatggcgctgcgcggtctcacgctcggc
cgctatgtgcctgctgtcgtacgcggtatggccggtgcagcggcataa
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