Paraburkholderia dioscoreae: PDMSB3_3208
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Entry
PDMSB3_3208 CDS
T08115
Name
(GenBank) putative periplasmic serine endoprotease DegP-like
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio01503
Cationic antimicrobial peptide (CAMP) resistance
pdio02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PDMSB3_3208
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
PDMSB3_3208
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdio01002
]
PDMSB3_3208
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pdio03110
]
PDMSB3_3208
Enzymes [BR:
pdio01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
PDMSB3_3208
Peptidases and inhibitors [BR:
pdio01002
]
Serine peptidases
Family S1: chymotrypsin family
PDMSB3_3208
Chaperones and folding catalysts [BR:
pdio03110
]
Other chaperones and cochaperones
DegP / HtrA
PDMSB3_3208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
PDZ_6
Trypsin
PDZ
PDZ_Tricorn
Peptidase_S46
Peptidase_S29
DUF6593
HAS-barrel
DAB2_SBM
Motif
Other DBs
NCBI-ProteinID:
VVD29664
UniProt:
A0A5Q4ZFE3
LinkDB
All DBs
Position
I:complement(3298824..3300347)
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AA seq
507 aa
AA seq
DB search
MTTFSVRKFLAAAVVAACLPLVPHMASAAPAANLPDFTDLVDKVGPAVVNIRTTTRVSSS
GARSGLPPGMDDGDMSEFFRRFFGIPLPQSPQSPGSPGSGSPRGGDNGGSGGSQDSPDNS
DQEQNSGVGSGFILSADGYVMTNAHVIDDADTIYVTLTDKREFKAKLIGVDDRTDVAVVK
ISAANLPTITIGDSNKVRVGEWVVAIGSPFGLENTVTAGIVSAKGRDTGDYLPFIQTDVA
VNPGNSGGPLINMQGEVIGINSQIYSRTGGFMGISFAIPIDEAMRVADQLKASGKVVRGR
IAVAIGEVTKDVADSLGLPKAQGALVSSVEPGGPADKAGVQPGDIILKFNGHSVDTATDL
PRMVGDTKPGTKSTITIWRKGQTRDLPVTIAEMQPDKTIKADQKKPPVPKQRATNVLGVA
VSDIPADQLKALKLHNGVQIDAVDGPAARVGLQKGDIILRVGDTDITSAKQFDDVSSHLD
SQKMVALLVRRGENTQFVPIRPRSVQK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgacgactttctcggtgcgcaaattcctcgcggccgcggtggtagcggcgtgtttgccg
ctcgtgccgcatatggcgtcggccgctcccgccgccaatctgcccgacttcactgacctg
gtcgacaaggtcggcccggcggtcgtcaacattcgcacgaccacacgcgtgtcgagcagc
ggtgcccgcagcggtttgccgccgggcatggacgacggcgatatgtcggaatttttccgg
cgcttcttcggcattccgttgccgcagtcgccccaatcgccgggttccccgggttcgggt
tcaccccgcggcggcgacaacggcggcagtggcggcagccaggactcgccggacaacagc
gatcaggaacagaacagcggagtcggctcgggctttatcctgtcggcggacggttacgtg
atgaccaacgcgcacgtcatcgacgacgcggacaccatttacgtcacgctcaccgacaag
cgcgaattcaaggcaaagctgatcggcgtggacgatcgcaccgacgtcgccgtcgtgaag
atcagtgccgccaatctgccgaccattacgatcggcgactcgaacaaggttcgcgtgggc
gagtgggtggtcgcgatcggctcgccgttcggcctggagaacacggtgacggccggcatc
gtcagcgccaaggggcgcgacacgggcgactatctgccgttcatccagaccgacgtggcc
gtcaatccgggcaactcgggcggtccgctgatcaacatgcagggcgaggtgatcggcatc
aactcgcagatctacagccgcaccggcggtttcatgggcatttcgttcgcgattccgatc
gacgaggccatgcgcgtggccgaccagttgaaggcgtcgggcaaggtcgtgcgcggccgg
atcgccgtggcgatcggcgaagtgaccaaagacgtggccgactcgcttggtttgccgaag
gcgcaaggcgcgctggtcagcagcgtcgaaccgggcggcccggcggataaagccggtgtg
cagccgggcgacatcatcctgaagttcaacggccattcggtcgacaccgcaacggacctg
ccgcgcatggtcggcgacacgaagccgggcaccaagtcgacgatcacgatctggcgcaag
ggccagacgcgcgatctgccggtgacgatcgccgaaatgcagccggacaagacgatcaaa
gcggatcagaagaagccgccggtgccgaagcagcgcgccacgaacgtgttgggtgtggcc
gtcagcgacatccctgccgatcagctgaaggcgctcaagctgcacaacggcgtgcagatc
gacgccgtggacggtccggcggcgcgtgtcggcctgcaaaagggcgacatcattctgcgg
gtgggagacacggacatcacgagcgcgaagcagttcgacgacgtgagttcgcacctcgat
tcgcagaagatggtcgcgctgctggttcgccgcggcgagaacacgcagttcgtgccgatc
cgcccgcgtagcgttcagaaatga
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integrated database retrieval system
