Paraburkholderia dioscoreae: PDMSB3_3270
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Entry
PDMSB3_3270 CDS
T08115
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PDMSB3_3270 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdio03019
]
PDMSB3_3270 (orn)
03009 Ribosome biogenesis [BR:
pdio03009
]
PDMSB3_3270 (orn)
Messenger RNA biogenesis [BR:
pdio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PDMSB3_3270 (orn)
Ribosome biogenesis [BR:
pdio03009
]
Eukaryotic type
Pre-60S particles
RNases
PDMSB3_3270 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
VVD29726
UniProt:
A0A5Q4ZIB5
LinkDB
All DBs
Position
I:complement(3359357..3359980)
Genome browser
AA seq
207 aa
AA seq
DB search
MTDILASTEQPPLVRSDMNLVWLDMEMTGLEPHSDRIIEIAVVVTNSTLDRMVEGPVLAI
HQSDETLAGMDQWNQNTHGRSGLIDRVKASTVSEADATEQIRDFLSVYVPPGKSPMCGNS
ICQDRRFMARWMPDLERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYREHFLIPSAPDAVNGAEKAAE
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatcctcgcatccaccgaacagccgccgctcgtgcgcagcgacatgaatctc
gtctggctggacatggaaatgaccgggctcgagccccattccgaccgcatcatcgaaatc
gcggtggtagtgacgaactccacgctcgacagaatggtcgaaggcccggttctggcgatt
caccagagcgacgagacgctcgccggaatggatcagtggaatcagaacacgcatggccgc
tcgggcctgatcgaccgcgtgaaggcctccacggtgagcgaggccgacgccaccgaacag
atccgcgatttcctgagcgtctacgtgccgccgggcaaatcgccgatgtgcggcaactcg
atctgccaggaccgccgcttcatggcgcgctggatgccggatctggagcgcttcttccat
taccgcaatctcgacgtcagcacgctcaaggaactgtgccgccgctggcagccggccatc
tacaaaggcttccagaagcgcgcgatgcatacggcgctggccgatattcatgagtcgatc
gacgagctgaagtactaccgcgagcacttcctgatcccgtcggcgccggacgctgttaac
ggcgcggaaaaagctgcggaataa
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integrated database retrieval system
