Paraburkholderia dioscoreae: PDMSB3_3300
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Entry
PDMSB3_3300 CDS
T08115
Symbol
waaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00541
Biosynthesis of various nucleotide sugars
pdio01100
Metabolic pathways
pdio01250
Biosynthesis of nucleotide sugars
Module
pdio_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PDMSB3_3300 (waaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pdio01005
]
PDMSB3_3300 (waaD)
Enzymes [BR:
pdio01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
PDMSB3_3300 (waaD)
Lipopolysaccharide biosynthesis proteins [BR:
pdio01005
]
Core region
PDMSB3_3300 (waaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
VVD29756
UniProt:
A0A5Q4ZID2
LinkDB
All DBs
Position
I:complement(3385076..3386068)
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AA seq
330 aa
AA seq
DB search
MTLIVTGAAGFIGSNLVKALNERGEQRIIAVDNLTRADKFKNLVDCEIDDYLDKTEFVER
FKRGDFGKVRAIFHEGACSDTMETDGRYMMDNNFRYSREVLDVCLAQNIQFLYASSAATY
GGSSRFVEEREVEQPLNVYGYSKFLFDQVIRRVLPTAKSQIAGFRYFNVYGPRETHKARM
ASVAFHNFNQFRAEGKVKLFGEYNGYAAGEQTRDFVSVEDVVKVNLFFFDNPDKSGIFNL
GSGRAQPFNDIASTVVNTLRTLNNEPALSLAEQVQRGMIEYIPFPDALRGKYQCFTQADQ
SKLRAAGYDAPFLSVQEGVDRYVRWLFGQV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcatcgtcaccggcgcggccggttttatcggcagcaatctcgtgaaggcgctc
aacgagcgcggtgaacagcgcatcatcgcggtggacaatctgacgcgcgcggacaagttc
aagaacctggtcgactgcgagatcgacgactacctcgacaaaaccgagttcgtcgaacgc
ttcaagcgcggggacttcggcaaggtgcgcgcgattttccacgaaggcgcctgttcggac
acgatggaaaccgacggccgctacatgatggacaacaacttccgctatagccgcgaggtg
ctcgacgtctgcctcgcgcagaacatccagttcctgtatgcatcctcggcggctacgtac
ggcggctcgagccgtttcgtcgaagagcgcgaagtcgagcagccgctgaacgtgtacggc
tactcgaagttcctgttcgaccaggtgatccgccgcgtgctgcccacggcgaaaagccag
attgccggcttccgttatttcaacgtatacgggccgcgcgaaacgcacaaggcacgcatg
gcgtcggtggcgtttcacaacttcaaccagttccgcgccgagggcaaggtcaagctgttc
ggcgaatacaacggctacgcggcgggtgagcagacgcgcgacttcgtttcggttgaagac
gtggtgaaggtcaacctgttcttcttcgacaatccggacaagtcgggcatcttcaatctg
ggtagcggccgtgcacaaccgttcaacgacatcgccagcacggtggtcaatacgctgcga
acgctgaacaacgaaccggcgttgtcgctcgcggaacaggtgcagcgcgggatgatcgaa
tatattccgttccccgatgcattgcgcggcaagtaccagtgcttcacgcaggcggatcag
tcgaagctgcgcgcggccggctacgacgcgccgttcctgagcgtgcaggaaggtgtcgat
cgttacgtacgttggctattcggccaggtgtaa
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