Paraburkholderia dioscoreae: PDMSB3_3382
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Entry
PDMSB3_3382 CDS
T08115
Name
(GenBank) Outer membrane protein (Porin)
KO
K03285
general bacterial porin, GBP family
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
PDMSB3_3382
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
VVD29838
UniProt:
A0A5Q4ZNU2
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All DBs
Position
I:3476291..3477436
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AA seq
381 aa
AA seq
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MKKTLMVAALTGVFATAAHAQSSVTLYGLIDAGITYTNNQHGHSNWQETSGSVNGSRWGL
RGSEDLGGGLKAIFTLENGFGINDGTLKQGGREFGRQAFVGLTSDQFGSVTLGRQYDSMV
DYVGPLALTGTQYGGTQFAHPFDNDNLNNSFRVNNSVKYQSVNYGGFKFGALYGFSNQAD
GFANNRAYSAGASYNWGGLNLAAAYLQLNSNGATGAAAAFNSGGAVSSDNTFFAGRQQTW
GAGANYAFGPATVGLVYSQTNLSSLAGIGAGASGQTGGIGFANNSAHFQNFEANARYALT
PAVSIAGSYTYTRASLAGTRPHWNQFNLQTAYALSKRTDVYLQGEYQQVNDNAVVDADIN
GLAASGNNKQVAVTAGLRHRF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacactcatggtcgcggcccttacgggcgttttcgcaacggcggcacatgcc
caaagcagcgtcacgctgtacggcttgatcgacgccggcatcacctatacgaacaaccag
cacggtcatagcaactggcaggaaacgagcggctcggtgaacggcagccgttggggtctg
cgcggttctgaagatctgggcggcggactgaaggccatcttcacgttggaaaacggcttc
ggcatcaatgacggcacgctcaagcaaggcggccgcgaattcggccgtcaagctttcgtg
ggtctgacgagcgaccagttcggctccgtcacccttggccgtcaatacgacagcatggtc
gactatgtcggcccgctggccctgaccggcacgcaatacggcggcacgcagttcgcgcac
ccgttcgacaatgacaacctgaacaactcgttccgcgtcaacaactcggtcaagtaccag
agcgtgaactacggcggcttcaagttcggcgcgttgtatggcttctcgaaccaggccgac
ggcttcgcgaacaaccgcgcatatagcgcgggcgcgtcgtacaactggggtggcctgaac
ctcgccgccgcttacctgcaactgaacagcaacggcgcaaccggcgcggctgcggcgttc
aattcgggtggcgcggtgtcgagcgacaacacgttctttgccggccgtcagcaaacgtgg
ggcgccggcgcgaactacgcgttcggcccggcaacggttggcctcgtgtattcgcaaacg
aacctgtcgagcctggctggtatcggcgcgggtgcatccggtcaaaccggcggtatcggc
ttcgccaacaacagcgctcacttccagaactttgaagcgaacgcccgctatgcactcacg
ccggcggtcagcattgccggttcgtatacgtacacccgtgcaagcctggctggcacgcgt
ccgcactggaatcagttcaatctgcaaaccgcatatgcgctgtccaagcgtaccgatgtg
tatctgcaaggggagtatcagcaagtcaacgacaacgccgtcgtggatgccgacatcaac
ggtctggccgcttcgggcaacaacaagcaggtcgctgtgaccgcaggtctgcgtcaccgc
ttctaa
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