KEGG   Paraburkholderia dioscoreae: PDMSB3_3416
Entry
PDMSB3_3416       CDS       T08115                                 
Symbol
ribD
Name
(GenBank) Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pdio  Paraburkholderia dioscoreae
Pathway
pdio00740  Riboflavin metabolism
pdio01100  Metabolic pathways
pdio01110  Biosynthesis of secondary metabolites
pdio01240  Biosynthesis of cofactors
pdio02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pdio00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PDMSB3_3416 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PDMSB3_3416 (ribD)
Enzymes [BR:pdio01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PDMSB3_3416 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PDMSB3_3416 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: VVD29872
UniProt: A0A5Q4Z2F5
LinkDB
Position
I:3504374..3505549
AA seq 391 aa
MFSQTDFVHMERALALARRGMYTTDPNPRVGCVLVKNGEVIGEGFTQPAGQDHAEIRALK
DARSRGHDLRGATAYVTLEPCSHFGRTPPCVNALIEAQIALVVAAMEDPNPLVSGRGLAI
LRDAGIEVRCGLLANEAHELNIGFVSRMTRGRPWVRMKVAASLDGRTGLPSGVSQWITGE
AARADGHAWRARASAILTGIGTVRGDDPRMTVRAVDTPRQPQRVLIDSQLDVPPEAQILA
GAPTLIFCGNLDQRHTDRANALRDRGAEIVQLANPAGKVDLPAVLKVLGERNVNELHVEA
GYKLNGSLLREGCVDELLVYLAPSLLGMDSMSMFSLAAPETLEDRVKLSFHAVDRIGDDL
RILARFVAQPAPQTAPVPEPGGDPASQPVSK
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgttttcgcaaaccgatttcgtccatatggaacgcgcgctcgcgttggccaggcgcggc
atgtacaccaccgatccgaatccccgggttggctgcgtgctcgtcaagaatggcgaggta
atcggcgaaggcttcactcaaccggccggtcaggatcacgccgagatccgcgcattgaaa
gatgcgcgctcgcgcggccatgatctgcgcggcgccaccgcctacgtgacgctggagcca
tgcagccacttcggccgcacgccgccgtgcgtcaacgcgctcatcgaagcccagatcgcg
ctcgtggtcgcggcgatggaagatcccaatccgctcgtatccggacgcggtctcgccata
ctgcgcgacgccggcatcgaagtgcgctgcggcctgctcgccaacgaagcgcacgaactc
aatatcggcttcgtctcgcgcatgacccgcggccgcccgtgggtacgcatgaaagtcgcg
gcctcgctggatggccgcaccggcttgccttcaggcgtcagccaatggattaccggcgaa
gcggcgcgcgccgacggccacgcctggcgcgctcgcgcatcggcgatcctgaccggcatc
ggcaccgtcagaggagacgatccgcgcatgacggtgcgcgccgtcgacacgccgcgccag
ccgcaacgcgtgctgatcgacagccagctcgacgtgccccccgaagcgcaaattctggcc
ggcgcgcccacattgatcttctgcggcaatctcgatcaacgccataccgatcgcgccaac
gcgttgcgcgatcgtggcgccgaaatcgttcagctggcgaacccggccggcaaggtcgat
ctgcctgcagtgctgaaagtgctcggcgagcgtaacgtgaacgaactgcatgtcgaggcg
ggctacaagctgaatggctcgctgctgcgcgaaggctgtgtcgacgaactgctcgtgtat
ctcgcgccgagcctgctcggcatggattcgatgagcatgttcagtctggccgcccctgaa
acgctcgaggatcgcgtcaaactgagcttccacgcagtcgaccggatcggcgacgatctg
cggattctcgcgcgctttgtggcgcagcccgcgcctcagaccgcacccgtacccgaaccc
ggcggcgatcccgcgtcccaacccgtttcgaaatga

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