KEGG   Paraburkholderia dioscoreae: PDMSB3_3453
Entry
PDMSB3_3453       CDS       T08115                                 
Name
(GenBank) Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
  KO
K07687  two-component system, NarL family, captular synthesis response regulator RcsB
Organism
pdio  Paraburkholderia dioscoreae
Pathway
pdio02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pdio00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PDMSB3_3453
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pdio02022]
    PDMSB3_3453
Two-component system [BR:pdio02022]
 NarL family
  RcsC-RcsD-RcsB (capsule synthesis)
   PDMSB3_3453
SSDB
Motif
Pfam: Response_reg GerE HTH_38 HTH_23 Sigma70_r4 HTH_28 DUF742 HTH_5 Sigma70_r4_2 HTH_7 HTH_Tnp_ISL3 HTH_40 MarR_2
Other DBs
NCBI-ProteinID: VVD29909
UniProt: A0A5Q4ZEQ0
LinkDB
Position
I:3536410..3537126
AA seq 238 aa
MNHFSIRVAIADDHPAVLIGLQQVLEHAGQIELVGTCRNSTQIVELLQHVACDVVICEYT
LPEGKYRDGLEFFGYLQRNFPDIGIVVLTTMNNRAVVRTLASQGNLSVISKADATGHIIT
AIHATVAGGNYHSPTIRSIASNVHSGAIHTATELSPKEAEVMRLLASGNTVTDIAAYLKR
SKQTISSHKRSAMRKFGASNDIELISFMLSREREIAPLVIQPENPASTRAMHQDLDAR
NT seq 717 nt   +upstreamnt  +downstreamnt
atgaaccatttctccatccgcgttgcgattgccgacgatcaccccgcggttctgatcgga
ctgcaacaagtccttgagcatgccggccagatagaactcgtaggaacctgccggaactcg
acgcagatcgtcgaactgctgcaacatgtggcatgcgacgtcgtgatctgcgaatacacg
ttacccgaaggtaaatatcgtgatggcctggaattctttggctatctgcaaaggaatttt
ccagatatcggcatagtcgtgctgacgacgatgaacaatcgcgcggtggtacgaaccctc
gcctctcaaggcaatctgtccgtcatcagcaaggccgatgcgacgggacacattatcacc
gcaatccatgccaccgttgcgggaggcaactaccattcgccgaccatccgatcgattgcg
tcgaatgtccacagcggcgcaattcatacggcaaccgaactctctccgaaagaagccgaa
gtcatgaggctcctcgcgtccggaaacacggtcacggacattgcggcttatctgaagcgc
agcaagcagacaatcagttcgcacaagcgaagtgcaatgcgcaagttcggcgcttcaaac
gatatcgaactgatttcgttcatgctgagcagggagcgtgagatcgcgccgttagtcatt
cagccggaaaacccggcctctacgcgcgcgatgcatcaggacctcgacgcgagatga

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