Paraburkholderia dioscoreae: PDMSB3_3576
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Entry
PDMSB3_3576 CDS
T08115
Name
(GenBank) Oligopeptide/dipeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PDMSB3_3576
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdio02000
]
PDMSB3_3576
Transporters [BR:
pdio02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PDMSB3_3576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_16
SMC_N
AAA_29
AAA_5
RsgA_GTPase
APS_kinase
nSTAND1
Mg_chelatase
nSTAND3
AAA_33
AAA_23
AAA_15
AAA_25
MobB
AAA_24
AAA_13
NACHT
tRNA_lig_kinase
DUF87
sCache_3_2
Motif
Other DBs
NCBI-ProteinID:
VVD30032
UniProt:
A0A5Q4Z2H1
LinkDB
All DBs
Position
I:3656919..3659096
Genome browser
AA seq
725 aa
AA seq
DB search
MNGPPPSSFPAFDVSKSDRTDALTVIGLTVTYRVRGRDREVLQDISFRVRRGEAYGLVGE
SGCGKSTVAMAALRYLPRNGKVKAGKIIVTGEDVQKLDADALRNMRARTISMVYQDPGRA
LNPSLTIARQVSEAFEAAGVARDEALRRTLEMLQRVRIAAPERVMESYPHQLSGGMQQRV
VIAMALASNPALLILDEPTTGLDATVEAEVLDLVAQLREELGTAVLFISHNLAVIGRMCE
RVGVLYAGKLVEEGATQDVFTRPRHPYTVGLLRCLPTAGRSKDSERLDTIAGSLPLPGAV
TQGCIYAERCRLADDRCRREAPPPYRVSAAHGDQMSRCHYHERAIELPRASAQALPECNG
ASFDGKPPALVLRAEKLSKTFHVSGAPLRAVDHVSIDLASGETLGLVGESGSGKTTLAKL
MLGLLTPDAGSVLELDGEPLAARVTRRSDDQVKSLQIVFQNPDSALNRAHSVKRLIGRAL
SRLTTLRGPAIDERLAALTAAVRLPQRYLDSRTRQLSGGLKQRVAIARAFAGEPRVVVCD
EPTSALDVSVQAAILNLLADLQRERGVSYVFISHDLHVVRYLSDRIAVLYLGRLLEIGPA
AAVFGGPHHPYTEALLSSVPTLDGRGGATRIRLSGDLPSAVSPPSGCVFHTRCPRKLGAI
CEQQDPPFLDAGAAAGPSAHRIRCHIPVDELRALQAASRDDADNVARKVPGNGSENAPEN
AGRDE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcccgccgccctcctcgttccccgccttcgatgtctcgaagagcgatcgcacg
gacgcgctgaccgtcatcggtctgacggtcacgtaccgcgtgcgcggacgcgatcgcgag
gtgctgcaggacatttcgtttcgcgtgcggcgcggcgaagcgtatggtctcgtcggcgag
tccggctgcggcaagtcgaccgttgcgatggcggcgctgcgctatctgccgcgcaacggc
aaagtgaaggccggcaagatcatcgtcaccggcgaggacgtgcagaagcttgacgccgac
gcgttgcgcaacatgcgcgccagaacgatttcaatggtctaccaggatccggggcgcgcg
ctgaatccgtcgctgacgatcgcgcggcaagtctccgaagcgttcgaagccgccggcgtc
gcgcgcgacgaagccttgcggcgcacgctggagatgttgcagcgcgtgcgcatcgccgcg
cccgagcgggtgatggagagttatccgcatcaactgtcgggcggcatgcaacagcgcgta
gtgatcgcgatggcgctcgcctcgaaccccgcgctgctgattctcgacgaaccgactacc
ggcctcgatgctaccgtcgaggccgaagtgctcgacctcgtcgcgcagttgcgcgaggaa
ctcggcacggctgtgctgttcatcagccacaacctcgcggtgatcgggcggatgtgcgaa
cgcgtcggcgtgctttacgcgggaaaactggtcgaggaaggcgcgacgcaagatgtcttc
acgcggccgcgccatccctatacggtcggactgttgcgctgtctgcccacggccgggcgc
agcaaggacagcgagcggctcgacacgatcgccggcagcctgccgttgccgggtgcggta
acgcagggctgcatctacgcagagcgctgccgcctcgccgacgaccgctgccgccgcgaa
gcgccgccgccgtatcgcgtgagcgccgcacacggcgatcagatgtcacgctgccattac
cacgaacgcgcgatcgaattgccgcgtgcaagcgcgcaagccttgccggagtgcaacggc
gcgtcgttcgacggcaaaccgcctgctctcgtcttgcgcgcggaaaaactgtcgaagacg
tttcacgtgtccggcgcgccgctgcgcgcggtggaccacgtctcaatcgatctcgccagc
ggtgagacgctcggcctcgtcggcgaatcgggcagcggcaagacgacgctcgccaaactg
atgctcggcctgctcacgccggatgcaggcagcgtgctcgaactggatggcgagccgctc
gcggcgcgcgtcacacgacgcagcgacgatcaggtcaagtcgctgcagatcgttttccag
aatccggactcggcgctcaatcgcgcgcattcggtgaaacggctgatcggccgcgcgctg
tcgcgcctcaccacgttgcgcgggcccgcgatcgacgaacggcttgccgccttgaccgcc
gcagtgcgtttgccgcagcgctatctcgactcgcgtacgcggcaactgtccggtggcctg
aaacagcgggtggcaattgcccgcgcgtttgccggcgaaccgcgcgtggtggtttgcgac
gaaccgacttccgcgctcgacgtttccgtgcaggccgcgatcctgaatctgctcgccgat
ctgcagcgcgagcgtggcgtgagttacgttttcatctcgcacgacctgcatgtggtgcgc
tatctgtcggatcgcatcgccgtgctgtatctgggcaggctgctggaaatcggcccggcg
gcggctgtgttcggcgggccgcaccatccttatacggaagcgctgctgtcttcggtaccg
acactcgatggccgcggcggcgcaacccgcatccggctatccggcgatctgccgagtgcg
gtatcgccgccatcgggctgcgtgttccacacgcgctgcccgcgtaagctcggcgcgatc
tgcgaacagcaggatccgccgttcctcgacgccggcgccgcggcagggccgtccgcgcat
cgaatccgctgtcacattcccgtcgacgaattgcgcgcgctgcaagccgcttcacgcgac
gatgcggacaacgtcgcgaggaaggttccgggcaacggttcggaaaacgcgcccgagaat
gccgggcgcgacgaatag
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