Paraburkholderia dioscoreae: PDMSB3_3784
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Entry
PDMSB3_3784 CDS
T08115
Name
(GenBank) Transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdio03000
]
PDMSB3_3784
Transcription factors [BR:
pdio03000
]
Prokaryotic type
Helix-turn-helix
Other families
PDMSB3_3784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
HTH_IclR
HTH_3
TetR_N
LacI
HTH_31
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
VVD30240
UniProt:
A0A5Q4YWA4
LinkDB
All DBs
Position
I:3871366..3872211
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AA seq
281 aa
AA seq
DB search
MMLSQVEEMRDQLRPSERKLADYVIEAPREVLDLSMTEVAARAGVSQPTIARFCHALGFS
GFREFKIRLAQGIASGVPTVYRDVRPDEGAPGLIAKVFDRTIGTLIEVRNSLSPDSVEAA
VDLLANAARIEFYGAGGSGIAAQDIQHKFFRLGMPSVAYSDPHTYSMSAALLGPGDVVVA
VSNTGRTRDIIEAARSALARGAKVIAITHGSSPLARVASICLFSNVVEENDVFSPMTSRM
SHLAIGDILAVGVALKRGPELVERVGQAKGVIGRLRVDGES
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtcccaggtggaagagatgcgcgaccagttgcggccgtccgaacgcaaactg
gccgattacgtgatcgaagcgccgcgcgaagtgctcgacttgtccatgaccgaagtggcc
gcccgcgcgggcgtgagccagccgaccattgcgcggttttgtcatgcgctcggcttttcg
gggtttcgcgagttcaagatccggcttgcgcaggggattgcgtcgggtgtgccgaccgtc
tatcgggacgtacggccggacgagggcgcgcccggtctcatcgccaaagttttcgaccgg
accatcggcacgctgatcgaagtgcgcaacagcttgtcaccggatagcgtcgaagcggcc
gtcgatctgctggcgaacgcggcgcgcatcgagttctacggggcgggcggctcgggcatt
gccgcgcaggatatccagcacaagtttttccggctcggcatgccgagcgtcgcgtactcc
gatccgcatacctattcgatgtcggcggcgctgctcggacccggcgatgtggtggtggcg
gtatcgaataccggccgcacccgcgatatcatcgaagccgcgcgttcggcgcttgcccgc
ggcgcgaaagtgatcgcgatcacgcatggcagctcaccgctcgcgcgggtcgcgtcgatc
tgcctgttctcgaacgtggtcgaagaaaacgatgtgttttcgccgatgacatcgcgcatg
tcgcatctggcgatcggcgacattctggcggtcggcgtcgcgctcaagcgcggccccgag
ttggtggagcgggtgggacaggcgaaaggggtgatcggacggttgagggtcgatggcgag
agttga
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integrated database retrieval system
