Paraburkholderia dioscoreae: PDMSB3_3797
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Entry
PDMSB3_3797 CDS
T08115
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio03030
DNA replication
pdio03430
Mismatch repair
pdio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PDMSB3_3797
03430 Mismatch repair
PDMSB3_3797
03440 Homologous recombination
PDMSB3_3797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdio03032
]
PDMSB3_3797
03400 DNA repair and recombination proteins [BR:
pdio03400
]
PDMSB3_3797
Enzymes [BR:
pdio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PDMSB3_3797
DNA replication proteins [BR:
pdio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PDMSB3_3797
DNA repair and recombination proteins [BR:
pdio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PDMSB3_3797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
VVD30253
UniProt:
A0A5Q4YUD7
LinkDB
All DBs
Position
I:complement(3894160..3895278)
Genome browser
AA seq
372 aa
AA seq
DB search
MQLRLDALEAHLAKGLAGLYVVYGDEHLLAQEACDRIRATARAAGFTDRSVFTVERGFDW
SSLLGASQSMSLFGDRQLVELRIPSGKPGKEGADALKALAAAVNEDVLTMITLPRLDAAT
QKSAWFTSLSDAGVALKIDPVERAQLPNWVGQRLAAQGQRVAAGEEGRRALAFIAERVEG
NLLAAHQEIQKLGLLYPAGSLSFEHVQDAVLNVARYDVFKLNEAMLAGDVGRLSRMLDGL
RGEGEAAVLVLWAVVEEVRTLLRIKRGVAAGKPLAMLVRENRVWGPRERLIGPALSRVSE
GTLEKALALAARLDRQVKGLSGGTPGNHRNDPPPDPWDGLFELAMTVAAPKTSPVPPPRP
RPGTAAPARRPA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcgacttgacgcgctcgaagcgcatctcgccaagggactcgccggactgtac
gtcgtgtacggcgacgagcacctgctcgcgcaggaagcgtgcgaccgcatccgcgccacc
gcgcgcgcggccggcttcaccgatcgctcggtgttcacggtggagcgcggcttcgactgg
agttcgctgctgggcgcgagccagtcgatgtcactgttcggcgaccgtcaactggtcgaa
ttgcgcattccgtcgggcaagcccggcaaggaaggcgcggacgcgctgaaagcgctggcc
gctgccgtgaatgaagatgtgctcaccatgatcacgctgccgcggctcgacgcggccacg
cagaagtcggcgtggttcacgtcgttgtccgacgcgggcgtcgcgttgaagatcgatccg
gtcgagcgtgcgcagttgcccaattgggttggccagcggctcgcggcgcagggtcaacgc
gtggccgccggtgaagaagggcggcgcgcgctggctttcatcgccgagcgtgtggagggc
aatctgctcgccgcgcatcaggaaatccagaagctggggctgctgtatccggccgggtcg
ctgagcttcgagcacgttcaggacgccgtgctcaacgtcgcccgttatgacgttttcaag
ttgaacgaagcgatgctggccggcgacgtcggccgtctgtcgcgcatgctcgacggcttg
cgcggagaaggcgaggccgcggtgctggtgctgtgggcggtggtggaagaagtccgcacg
ctgctgcggatcaaacgcggcgtcgcggccggcaagccgctcgcgatgctggtgcgcgag
aatcgtgtttgggggccgcgcgaacggttgatcggcccggcgttgtcgcgtgtcagcgaa
ggcacgctggaaaaggcgcttgcgctggcggcgcggctcgatcggcaggtgaagggtttg
tcgggcggcacgccgggtaatcatcgcaacgatccgccgcctgatccgtgggatggcctg
ttcgaattggccatgacggtggcggcgccgaaaacgtcgcccgtgccaccgccacgacct
cggcccgggactgctgcaccggcacgaaggccggcctga
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