Paraburkholderia dioscoreae: PDMSB3_3809
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Entry
PDMSB3_3809 CDS
T08115
Symbol
gapA
Name
(GenBank) glyceraldehyde-3-phosphate dehydrogenase
KO
K00134
glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:
1.2.1.12
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00010
Glycolysis / Gluconeogenesis
pdio00710
Carbon fixation by Calvin cycle
pdio01100
Metabolic pathways
pdio01110
Biosynthesis of secondary metabolites
pdio01120
Microbial metabolism in diverse environments
pdio01200
Carbon metabolism
pdio01230
Biosynthesis of amino acids
Module
pdio_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
pdio_M00002
Glycolysis, core module involving three-carbon compounds
pdio_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
pdio_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pdio_M00552
D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PDMSB3_3809 (gapA)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
PDMSB3_3809 (gapA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdio04131
]
PDMSB3_3809 (gapA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdio04147
]
PDMSB3_3809 (gapA)
Enzymes [BR:
pdio01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.12 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)
PDMSB3_3809 (gapA)
Membrane trafficking [BR:
pdio04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
PDMSB3_3809 (gapA)
Exosome [BR:
pdio04147
]
Exosomal proteins
Proteins found in most exosomes
PDMSB3_3809 (gapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gp_dh_C
Gp_dh_N
NAD_binding_3
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
VVD30265
UniProt:
A0A5Q4ZGB6
LinkDB
All DBs
Position
I:complement(3906603..3907613)
Genome browser
AA seq
336 aa
AA seq
DB search
MTIRVAINGYGRIGRNTLRAFYENGKKHDIEIVAINDLGDAKTNAHLTQYDTAHGKFPGE
VSVDGDYLVVNGDKIRVLANRNPAELPWGELNVDVVMECTGFFTTKEKASAHIKGGAKKV
IISAPGGKDVDATIVYGVNHNVLKASDTVISNASCTTNCLAPLVKPLNDKIGLVNGLMTT
IHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAASAVGLVLPELNGKLDGYAIRVPTI
NVSIVDLSFIAARDTTVEEVNAIMKEASEGSLKGILGYNQAPLVSIDFNHNPASSTFDAT
LTKVSGRLVKVSSWYDNEWGFSNRMLDTAVALAHAK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgacgattcgcgtcgcaatcaacggctacggccgtattggccgcaacacgctgcgcgcc
ttctatgaaaacggcaagaagcacgatatcgaaatcgtcgccatcaacgatctcggcgat
gccaagaccaacgctcacctgacgcaatacgacacggcgcacggcaagttcccgggcgaa
gtgtcggtggacggcgactacctggttgtcaacggcgacaagatccgcgtgctggccaac
cgcaacccggctgaactgccgtggggcgagctgaacgtcgacgtcgtgatggaatgcacg
ggctttttcacgaccaaggaaaaggccagcgcgcacatcaagggcggcgcaaagaaggtg
atcatctcggcgccgggcggcaaagacgtcgacgccacgatcgtctacggcgtgaaccac
aacgtgctgaaggcctcggacacggtgatctcgaacgcatcgtgcacgacgaactgcctc
gcgccgctcgtcaagccgttgaacgacaagatcggcctcgtgaacggtctgatgaccacg
atccacgcgtacacgaacgaccaggttctgacggacgtgtaccacgaagacctgcgccgc
gcgcgctcggccacgcacagccagatcccgaccaagaccggcgcggcatcggcggtcggc
ctggtgctgccggaactgaacggcaagctggacggctacgcgattcgcgtcccgacgatc
aacgtgtcgatcgtcgatctgtcgttcatcgccgcgcgcgacacgacggtcgaagaagtc
aacgcgatcatgaaggaagcgtcggaaggctcgctgaagggcattctcggctacaaccag
gcaccgctggtgtcgatcgacttcaaccacaacccggcttcgtcgacgttcgacgccacg
ctcaccaaggtgtcgggccgtctggtgaaggtgtcgagctggtacgacaacgaatggggc
ttctcgaaccgcatgctggacacggctgtggcgctcgcccacgcgaagtaa
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